Parental gene:

GDI2, ENSCAFG00000005223

Aliases:GDI2, GDI-2
Description:Canis lupus familiaris GDP dissociation inhibitor 2 (GDI2), mRNA. [Source:RefSeq mRNA;Acc:NM_001003184]
Organism:Dog (Canis familiaris)
Coordinates:2:30150768..30168957(+)


>ENSCAFG00000005223
GAATGTATCCTGTCAGGTATAATGTCGGTGAATGGGAAGAAAGTTCTTCACATGGATAGAAACCCATATTATGGAGGAGA
AAGTGCATCTATAACACCTCTGGAAGATTTATACAAAAGATTTAAGATACCAGGAGCACCACCAGCCTCGATGGGAAGAG
GGAGAGACTGGAACGTGGACCTGATCCCTAAGTTCCTCATGGCCAATGGTCAGCTTGTGAAGATGCTGCTTTATACAGAG
GTCACTCGTTATCTGGATTTCAAAGTGACTGAAGGGAGCTTTGTCTACAAGGGAGGAAAAATCTACAAGGTTCCTTCCAC
TGAAGCAGAAGCCCTGGCATCTAGCTTAATGGGACTGTTTGAAAAACGTCGCTTCAGAAAATTCCTAGTGTATGTTGCCA
ACTTTGATGAAAAAGATCCCAGAACTTTTGAGGGCATCGATCCTAAGAAGACTGCCATGCGAGAGGTGTACAAGAAATTT
GACTTGGGACAAGATGTCATAGACTTTACTGGCCATGCCCTGGCACTTTACAGGACCGATGACTATTTAGATCAGCCATG
TTGTGAAACCATTAATAGGATTAAACTTTACAGCGAGTCTCTGGCAAGATATGGCAAAAGCCCGTACCTCTACCCACTGT
ATGGCCTTGGGGAGCTGCCGCAGGGATTTGCAAGGCTAAGTGCTATTTATGGTGGCACCTACATGCTCAATAAACCCATT
GAAGAAATCATTGTGCAAAATGGCAAAGTGATTGGTGTGAAATCTGAAGGAGAGGTTGCTCGCTGCAAGCAGCTCATCTG
TGACCCCAGCTACGTCAAAGACCGGGTAGAGAAGGTGGGCCAGGTCATCAGGGTTATCTGCATTCTCAGCCACCCCATCA
AGAACACCAATGACGCCAACTCCTGCCAGATCATCATCCCCCAGAACCAGGTCAATCGGAAGTCAGACATCTACGTGTGC
ATGATTTCCTCTGCACACAATGTGGCCGCGCAAGGGAAGTACATCGCCATAGTGAGCACGACGGTGGAGACCAAGGAACC
TGAGAAGGAAATCAGACCAGCTTTGGAGCTTCTGGAACCAATTGAACAGAAATTTGTTAGCATCAGCGACCTCCTTGTAC
CCAAAGACCTGGGGACGGAAAGCCAGATCTTTATTTCCCGCACGTACGATGCTACAACTCACTTTGAGACCACCTGTGAC
GATATTAAAAACATCTACAAGAGGATGACCGGCTCCGAGTTTGACTTTGAGGAAATGAAGCGCAAGAAGAACGACATCTA
CGGGGAAGACTAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 92 .36 RPM
SRP017611_brain 98 .92 RPM
SRP017611_kidney 219 .05 RPM
SRP017611_liver 166 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005316 ortholog_one2one 1 retrogene
retro_btau_1208,
Canis familiaris ENSCAFG00000017406 within_species_paralog 1 retrogene
retro_cfam_1873,
Callithrix jacchus ENSCJAG00000020512 ortholog_one2one 2 retrogenes
retro_cjac_1168, retro_cjac_3115,
Cavia porcellus ENSCPOG00000013449 ortholog_one2one 1 retrogene
retro_cpor_696,
Gorilla gorilla ENSGGOG00000003623 ortholog_one2one 1 retrogene
retro_ggor_2590,
Mus musculus ENSMUSG00000021218 ortholog_one2one 2 retrogenes
retro_mmus_2971, retro_mmus_360,
Oryctolagus cuniculus ENSOCUG00000005367 ortholog_one2many 1 retrogene
retro_ocun_69,
Ictidomys tridecemlineatus ENSSTOG00000006449 ortholog_one2one 1 retrogene
retro_itri_757,
Tupaia belangeri ENSTBEG00000011523 ortholog_one2one 1 retrogene
retro_tbel_644,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_886 91.53 57.21
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2. retro_cfam_2196 96.70 84.65
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Download FASTA sequences of all ENSCAFG00000005223 retrocopies