Parental gene:

GDI2, ENSCPOG00000013449

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_16:17378596..17413374(+)


>ENSCPOG00000013449
ATGAATGAGGAATACGACGTGATCGTGCTGGGCACCGGCCTGACGGAATGTATCCTGTCAGGTATAATGTCAGTGAATGG
AAAGAAAGTTCTTCACATGGATCAAAATCCATATTATGGAGGAGAAAGTGCATCTATAACACCACTGGAAGATTTATACA
AAAGATTTAAATTACCAGGAGTACCTCCAGCATCAATGGGGAGAGGAAGAGACTGGAATGTTGACTTAATTCCCAAGTTC
CTGATGGCTAATGGTCAGCTGGTCAAGATGCTGCTCTATACAGAAGTTACTCGATACATGGATTTCAAAGTAATTGAAGG
GAGCTTTGTCTACAAGGGAGGAAAAATCTACAAGGTTTCTTCTACTGAAGCAGAAGCCCTGGCATCTAGCTTAATGGGAC
TGTTTGAAAAACGTCGCTTCAGAAAGTTCCTAGTGTATGTTGCCAACTTTGATGAAAAAGACCCTAGAACTTTTGAGGGC
ATTGATCCTAAGAAGACCACAATGCGAGATCTGTATAAGAAATTTGACTTGGGCCAAGATGTTATAGATTTTACTGGTCA
TTCTCTTGCACTGTACCGAACTGATGACTACTTAGATCAGCCATGTCTTGAAACCATTGATAGAATTAAACTTTACAGTG
AGTCTTTGGCGAGATATGGCAAAAGCCCGTACCTTTATCCACTCTATGGCCTTGGAGAACTGCCACAAGGATTTGCCAGG
CTAAGTGCTATTTATGGTGGTACCTACATGTTGAATAAACCAATTGAAGAAATAATTGTGCAGAATGGAAAAGTGGTTGG
TGTAAAATCTGAAGGAGAGATTGCTCGTTGTAAGCAGCTCATCTGTGACCCAAGTTATGTAAAGGATCGGGTAGAAAAAG
TGGGGCAGGTAATTAGAGTTATATGTATCCTCAGCCACCCCATCAAGAATACCAACGATGCCAATTCCTGTCAGATAATT
ATTCCACAGAACCAAGTCAATCGAAAATCAGATATCTATGTTTGCATGATCTCCTCTGCACACAATGTGGCAGCACAAGG
GAAGTACATTGCCATTGTTAGTACAACTGTGGAAACCAAGGAACCTGAGAAAGAAATCAGACCAGCTTTGGAGCTGTTGG
AACCAATTGAACAGAAATTTGTTAGCATCAGTGACCTCCTTGTACCAAAAGATTTGGGAACAGACAGCCAGATCTTTATT
TCCCGTGCATATGATGCTACAACTCACTTTGAGACAACCTGTGATGACATTAAAGACATCTATAAAAGGATGACAGGATC
TGAGTTTGACTTTGAGGAAATGAAGCGCAAGAAAAATGACATCTATGGGGAAGAC

Library Parental gene expression (RPM)
SRP017611_brain 95 .42 RPM
SRP017611_kidney 149 .70 RPM
SRP017611_liver 149 .56 RPM
SRP040447_lung 105 .04 RPM
SRP040447_skeletal_muscle 59 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005316 ortholog_one2one 1 retrogene
retro_btau_1208,
Canis familiaris ENSCAFG00000005223 ortholog_one2one 2 retrogenes
retro_cfam_2196, retro_cfam_886,
Callithrix jacchus ENSCJAG00000020512 ortholog_one2one 2 retrogenes
retro_cjac_1168, retro_cjac_3115,
Gorilla gorilla ENSGGOG00000003623 ortholog_one2one 1 retrogene
retro_ggor_2590,
Mus musculus ENSMUSG00000021218 ortholog_one2one 2 retrogenes
retro_mmus_2971, retro_mmus_360,
Oryctolagus cuniculus ENSOCUG00000005367 ortholog_one2many 1 retrogene
retro_ocun_69,
Ictidomys tridecemlineatus ENSSTOG00000006449 ortholog_one2one 1 retrogene
retro_itri_757,
Tupaia belangeri ENSTBEG00000011523 ortholog_one2one 1 retrogene
retro_tbel_644,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_696 73.65 73.71
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Download FASTA sequences of all ENSCPOG00000013449 retrocopies