Parental gene: | GDI2, ENSCJAG00000020512 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 7:4309042..4487050(-) |
>ENSCJAG00000020512
ATGAATGAGGAGTACGACGTGATCGTGCTGGGCACCGGCCTGACGGAATGTATCCTGTCTGGTATAATGTCAGTGAATGG
CAAGAAAGTTCTTCATATGGATCAAAACCCTTACTATGGAGGAGAGAGTGCGTCTATAACACCACTGGAAGATTTATACA
AAAGATTTAAAATACCGGGATCACCACCAGAGTCAATGGGGAGAGGAAGAGACTGGAATGTTGACTTGATTCCCAAGTTC
CTTATGGCTAATGGTCAGCTGGTTAAGATGCTGCTTTATACAGAGGTAACTCGCTATCTGGATTTTAAAGTGACTGAAGG
AAGCTTTGTCTATAAGGGTGGAAAAATCTACAAGGTTCCTTCCACTGAAGCAGAAGCCCTGGCATCTAGTTTAATGGGAC
TGTTTGAAAAACGTCGCTTCAGGAAATTCCTTGTGTATGTTGCCAACTTCGATGAAAAAGATCCGAGAACTTTTGAAGGC
ATTGATCCTATGAAGACCACAATGCGAGAGGTGTATAAGAAATTTGATTTGGGCCAAGATGTTATAGATTTTACAGGTCA
TGCTCTTGCACTTTACAGAACTGATGACTACTTAGATCAACCATGTTGTGAAACCATTAATAGAATTAAACTTTATAGTG
AGTCTTTGGCAAGATATGGCAAAAGCCCGTACCTTTATCCGCTCTATGGCCTTGGAGAACTGCCCCAAGGATTTGCAAGG
CTAAGTGCTATTTATGGAGGTACCTATATGCTGAATAAACCCATTGAAGAAATCATTGTGCAGAATGGAAAAGTAATTGG
TGTAAAATCTGAAGGAGAAATTGCTCGCTGTAAGCAGCTCATCTGTGATCCCAGCTATGTAAAAGATCGGGTAGAAAAAG
TGGGCCAGGTGATCAGAGTTATTTGCATCCTCAGCCACCCCATCAAGAACACCAATGATGCCAACTCCTGCCAGATCATT
ATTCCACAGAACCAAGTCAATCGAAAGTCAGATATCTATGTCTGCATGATCTCCTCTGCGCACAATGTGGCGGCACAAGG
GAAGTATATCGCCATAGTTAGTACCACTGTGGAAACCAAGGAGCCTGAAAAGGAAATCAGACCAGCTTTGGAGCTCTTGG
AACCAATTGAACAGAAATTTATTAGCATCAGCGACCTCCTGGTACCAAAAGACTTGGGAACAGAAAGCCAGATCTTTATT
TCCCGCACATATGATGCTACCACTCATTTCGAGACAACATGTGATGACATTAAAAACATCTATAAGAGGATGACAGGATC
AGAGTTTGACTTTGAGGAAATGAAGCGCAAGAAAAACGACATCTATGGGGAAGACTAA
ATGAATGAGGAGTACGACGTGATCGTGCTGGGCACCGGCCTGACGGAATGTATCCTGTCTGGTATAATGTCAGTGAATGG
CAAGAAAGTTCTTCATATGGATCAAAACCCTTACTATGGAGGAGAGAGTGCGTCTATAACACCACTGGAAGATTTATACA
AAAGATTTAAAATACCGGGATCACCACCAGAGTCAATGGGGAGAGGAAGAGACTGGAATGTTGACTTGATTCCCAAGTTC
CTTATGGCTAATGGTCAGCTGGTTAAGATGCTGCTTTATACAGAGGTAACTCGCTATCTGGATTTTAAAGTGACTGAAGG
AAGCTTTGTCTATAAGGGTGGAAAAATCTACAAGGTTCCTTCCACTGAAGCAGAAGCCCTGGCATCTAGTTTAATGGGAC
TGTTTGAAAAACGTCGCTTCAGGAAATTCCTTGTGTATGTTGCCAACTTCGATGAAAAAGATCCGAGAACTTTTGAAGGC
ATTGATCCTATGAAGACCACAATGCGAGAGGTGTATAAGAAATTTGATTTGGGCCAAGATGTTATAGATTTTACAGGTCA
TGCTCTTGCACTTTACAGAACTGATGACTACTTAGATCAACCATGTTGTGAAACCATTAATAGAATTAAACTTTATAGTG
AGTCTTTGGCAAGATATGGCAAAAGCCCGTACCTTTATCCGCTCTATGGCCTTGGAGAACTGCCCCAAGGATTTGCAAGG
CTAAGTGCTATTTATGGAGGTACCTATATGCTGAATAAACCCATTGAAGAAATCATTGTGCAGAATGGAAAAGTAATTGG
TGTAAAATCTGAAGGAGAAATTGCTCGCTGTAAGCAGCTCATCTGTGATCCCAGCTATGTAAAAGATCGGGTAGAAAAAG
TGGGCCAGGTGATCAGAGTTATTTGCATCCTCAGCCACCCCATCAAGAACACCAATGATGCCAACTCCTGCCAGATCATT
ATTCCACAGAACCAAGTCAATCGAAAGTCAGATATCTATGTCTGCATGATCTCCTCTGCGCACAATGTGGCGGCACAAGG
GAAGTATATCGCCATAGTTAGTACCACTGTGGAAACCAAGGAGCCTGAAAAGGAAATCAGACCAGCTTTGGAGCTCTTGG
AACCAATTGAACAGAAATTTATTAGCATCAGCGACCTCCTGGTACCAAAAGACTTGGGAACAGAAAGCCAGATCTTTATT
TCCCGCACATATGATGCTACCACTCATTTCGAGACAACATGTGATGACATTAAAAACATCTATAAGAGGATGACAGGATC
AGAGTTTGACTTTGAGGAAATGAAGCGCAAGAAAAACGACATCTATGGGGAAGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 105 .53 RPM |
| SRP051959_skeletal_muscle | 36 .51 RPM |
| SRP051959_lymph_node | 84 .91 RPM |
| SRP051959_lung | 71 .69 RPM |
| SRP051959_liver | 111 .51 RPM |
| SRP051959_kidney | 82 .95 RPM |
| SRP051959_heart | 57 .76 RPM |
| SRP051959_colon | 95 .32 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000005316 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000005223 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000013449 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000003623 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000021218 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000005367 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006449 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000011523 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1168 | 83.22 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_3115 | 70.20 | 54.38 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000020512 retrocopies