Parental gene:

PSMD8, ENSCAFG00000005931

Aliases:None
Description:proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 [Source:HGNC Symbol;Acc:9566]
Organism:Dog (Canis familiaris)
Coordinates:1:114619889..114626281(-)


>ENSCAFG00000005931
ATGTTCGTTAAGGGCCGGACTCCCAGGGCACCTCCCCGAGAGCGACTAAACGCTAACGGCGGCGGGCGGAGGCCTGCAGC
CGTAGCCCCGCCCCCGGCGCTGGGCTCCACCTCCCGGCCCCACTTCCGCCGGGTGAGCGTCTGTCGGCGTCGCTGCCGTA
AGGCGGGCCGGAGGTTTGCCGCATCACGGAAGATGGCGGCCACGGCGGTGAACGGGGCGCCGGGCGCCTCGGGCTCGGGC
CCTGCGGCGGCCTCGGGCGCAGTCCTGCAGGTCGCGGCCGGCATGTACGAGCAACTTAAGGGCGAGTGGAACCGTAAAAG
CCCCAATCTTAGCAAGTGCGGTGAAGAGCTGGGCCGTCTCAAGCTGGTTCTGCTGGAACTCAACTTCTTGCCAACCACAG
GGACCAAACTGACCAAACAGCAGCTCATTCTGGCCCGTGACATTCTGGAGATTGGGGCCCAGTGGAGCATCCTGCGCAAG
GACATCCCCTCCTTCGAGCGCTACATGGCCCAGCTCAAATGCTACTACTTTGATTACAAGGAGCAACTCCCCGAGTCAGC
CTACATGCACCAGCTCTTGGGCCTCAACCTCCTCTTCCTGCTATCCCAGAACCGGGTAGCTGAGTTCCACACAGAGTTGG
AGCGGCTGCCTGCCAAGGACATCCAGACCAATGTATACATCAAGCATCCCGTGTCCCTGGAGCAATACCTGATGGAGGGC
AGCTATAACAAGGTGTTCCTGGCCAAAGGCAACATCCCTGCTGAGAGCTATACCTTCTTCATTGACATCTTGCTTGACAC
GATCAGGGATGAGATTGCTGGGTGCATCGAGAAGGCCTATGAGAAAATCCTTTTCACTGAGGCCACCCGGATCCTCTTCT
TCAACACACCCAAAAAGATGACGGACTACGCCAAGAAGCGAGGGTGGGTTCTGGGCCTCAACAACTACTACAGCTTTGCC
AGCCAGCAGCAGAAGCCAGAAGACACCACCATCCCCTCCACGGAACTGGCCAAACAGGTCATCGAGTATGCCCGGCAGCT
GGAGATGATCGTCTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 82 .28 RPM
SRP017611_brain 73 .12 RPM
SRP017611_kidney 122 .37 RPM
SRP017611_liver 36 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Myotis lucifugus ENSMLUG00000009902 ortholog_one2one 2 retrogenes
retro_mluc_2137, retro_mluc_2480,
Monodelphis domestica ENSMODG00000013151 possible_ortholog 1 retrogene
retro_mdom_58,
Sus scrofa ENSSSCG00000002956 ortholog_one2one 1 retrogene
retro_sscr_195,
Ictidomys tridecemlineatus ENSSTOG00000014464 possible_ortholog 1 retrogene
retro_itri_10,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_2206 70.08 71.79
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Download FASTA sequences of all ENSCAFG00000005931 retrocopies