Parental gene:

PSMD8, ENSSTOG00000014464

Aliases:None
Description:proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 [Source:HGNC Symbol;Acc:9566]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393611.1:1137528..1144218(+)


>ENSSTOG00000014464
ATGTTCATTAAGGGCAGGGCTTCCGGGACTTCTCCCAGAGAGCTACGGCTCGCCACCCGCGGCGGGGAGAGGCGGGCAGT
CGTAGCTCCGCCCCCGCCCTTGGGCTCCACCTCCCAGCCCCATTTCCGCCGGGCGAAAGTCCGTAGGCGCCGCTGCCGTA
AACGAGGCCGGCGGTTCGCCAAATCACGGAAGATGGCGGCCGCGACCATGAACGGAACGACAGGCATCTCGAGCTCCGGG
TCTGCGGCGGCCTCGGGCGCTATCCTGCAGGCCGCGGCCGGCATGTACGAGCAACTCAAGGGCGAGTGGAACCGGAAAAG
CCCCAATCTTAGCAAATGCGGAGAAGAGCTGGGCCGCCTCAAGCTGGTTCTGCTGGAGCTTAACTTCCTGCCAACCACAG
GGACCAAGCTGACCAAACAACAGCTCATTCTGGCCCGTGACATATTGGAGATCGGGGCCCAGTGGAGCATCCTTCGCAAG
GACATCCCCTCCTTCGAGCGCTACATGGCTCAGCTCAAGTGCTACTACTTTGATTACAAGGAGCAGCTCCCCGAGTCAGC
CTACATGCACCAGCTTTTGGGCCTCAATCTTCTCTTCCTGCTGTCCCAGAACCGGGTGGCTGAGTTTCATACAGAGTTGG
AGCGCCTACCTGCCAAGGATATCCAGACCAATGTCTACATCAAGCACCCTGTGTCCCTTGAGCAGTACCTGATGGAGGGC
AGCTACAACAAGGTGTTCCTGGCCAAAGGCAACATCCCTGCTGAGAGCTACACCTTCTTTATCGACATTCTGCTGGACAC
TATCAGGGACGAGATTGCAGGGTGCATTGAGAAGGCCTACGAGAAAATCCTTTTCACTGAGGCCACCCGGATCCTCTTCT
TCAACACACCCAAAAAGATGACAGACTACGCTAAGAAGCGAGGGTGGGTCCTGGGCCCCAACAACTACTACAGTTTTGCC
AGCCAGCAGCAGAAGCCAGAAGACACCATCATCCCCTCTACAGAACTGGCCAAGCAAGTCATCGAGTATGCCCGGCAGCT
GGAGATGATTGTCTGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005931 possible_ortholog 1 retrogene
retro_cfam_2206,
Echinops telfairi ENSETEG00000013316 possible_ortholog 3 retrogenes
retro_etel_1148, retro_etel_1902, retro_etel_285,
Homo sapiens ENSG00000099341 ortholog_one2one 1 retrogene
retro_hsap_456,
Macropus eugenii ENSMEUG00000006596 possible_ortholog 2 retrogenes
retro_meug_1494, retro_meug_173,
Myotis lucifugus ENSMLUG00000009902 possible_ortholog 2 retrogenes
retro_mluc_2137, retro_mluc_2480,
Macaca mulatta ENSMMUG00000031219 possible_ortholog 1 retrogene
retro_mmul_534,
Monodelphis domestica ENSMODG00000013151 possible_ortholog 1 retrogene
retro_mdom_58,
Nomascus leucogenys ENSNLEG00000016876 ortholog_one2one 1 retrogene
retro_nleu_878,
Otolemur garnettii ENSOGAG00000004068 possible_ortholog 1 retrogene
retro_ogar_1338,
Pongo abelii ENSPPYG00000009931 ortholog_one2one 1 retrogene
retro_pabe_277,
Pan troglodytes ENSPTRG00000010926 ortholog_one2one 1 retrogene
retro_ptro_343,
Sus scrofa ENSSSCG00000002956 possible_ortholog 1 retrogene
retro_sscr_195,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_10 90.28 82.05
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Download FASTA sequences of all ENSSTOG00000014464 retrocopies