Parental gene:

AMT, ENSCAFG00000011489

Aliases:None
Description:Canis lupus familiaris aminomethyltransferase (AMT), nuclear gene encoding mitochondrial protein, mRNA. [Source:RefSeq mRNA;Acc:NM_001033993]
Organism:Dog (Canis familiaris)
Coordinates:20:39815813..39820528(+)


>ENSCAFG00000011489
ATGCAGCGGGCAATGACCGTGGTACCCCATCTGGGCTTGCGGCTGCAGGCGCTCCCGTTGGCCCTGGGCCGTCCTCTCAG
TCGCGCACAGGACGTACTCCGAAGGACACCTCTTTATGACTTCCACCTGGCTCATGGCGGGAAGATGGTGGCGTTTGCAG
GCTGGAGTCTGCCTGTACAGTACCGGGACAGTCATGTTGACTCACACCTGCACACACGCCGGCACTGCTCGCTCTTTGAC
GTGTCCCACATGCTGCAGACCAAGATACTTGGTTGTGACCGTGTGAAGCTGATGGAGAGTCTAGTGGTTGGAGATATTGC
AGAGCTAAGGCCAAACCAGGGGACACTGTCGCTGTTTACCAATGAGGCTGGAGGCATCGAAGATGACTTGATTGTGACCA
GCACCTCTGAGGGGTACCTGTATGTGGTGTCCAATGCTGGCTGCTGGGACAAGGACTTGGCCCTCATGCAGGGCAAGGTC
AGGGAGCTTCAAAACATGGGCAGTGATGTGAGCCTGGAGGTGGTGGATAATGCCTTGCTAGCCCTGCAAGGCCCCACTGC
GACCCAGGTGTTGCAGGCCGGTGTGGCAGATGATTTGAGGAAATTGCCCTTCATGACCAGTGCTGTGATGGAGGTGTTTG
GTGTGTCCGGCTGCCGCGTGACCCGCTGTGGCTACACAGGAGAGGATGGTGTGGAGATCTCGGTGCCAGCAGCAGCGGCA
GTCCGCCTGGCTGCAGCTCTGCTGGAAAACCCAGAGGTGAAGCTGGCAGGGCTGGCAGCTCGGGACAGCCTGCGCCTAGA
GGCAGGCCTCTGCCTGTATGGGAGTGACATTGATGAGCACACCACGCCTGTGGAAGGCAGCCTTAGTTGGACACTGGGAA
AGCGCCGCCGAGCTGCCATGGACTTCCCTGGAGCCTCAGTCATCATTGCCCAGCTGAAGGGCAAGGTGCAGCGGAGACGT
GTGGGGTTAACATGTGAGGGGGCACCTGTGCGGGCACACAGCCCCATCCTGAATATGGAGGGCACCGTGATTGGTACAGT
GACCAGTGGCTGCCCCTCTCCCTGCCTGAAGAAGAATGTGGCCATGGGTTATGTGCCCTCTGAGTACAGTCGGCCAGGTA
CCCCACTGCTGGTAGAAGTGCGGCGGAAGCAGCAAATGGCTGTGGTCAGCAAGATGCCCTTTGTGACCACAAATTACTAT
ACCCTCAAGTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 22 .26 RPM
SRP017611_brain 13 .89 RPM
SRP017611_kidney 92 .58 RPM
SRP017611_liver 57 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000003962 ortholog_one2one 1 retrogene
retro_cjac_1895,
Homo sapiens ENSG00000145020 ortholog_one2one 1 retrogene
retro_hsap_2953,
Monodelphis domestica ENSMODG00000012973 ortholog_one2one 1 retrogene
retro_mdom_1809,
Pongo abelii ENSPPYG00000013871 ortholog_one2one 1 retrogene
retro_pabe_2449,
Rattus norvegicus ENSRNOG00000050214 ortholog_one2one 1 retrogene
retro_rnor_1397,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1035 88.28 71.96
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Download FASTA sequences of all ENSCAFG00000011489 retrocopies