Parental gene: | AMT, ENSPPYG00000013871 |
| Aliases: | None |
| Description: | aminomethyltransferase [Source:HGNC Symbol;Acc:473] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 3:97088504..97094068(+) |
>ENSPPYG00000013871
ATGCAGAGGGCTGTAAGTGTGGTGGCCCATCTGGGCTCTCGCCTGCAGGCATTCTCCCCGGCCTTGTGTCGTCCATTTAG
TTGCGCACAGGAGGTGCTCCGCCGGACACCGCTGTATGACTTCCACCTGGCCCACGGCGGGAAAATGGTGGCGTTTGCGG
GTTGGAGTCTGCCAGTGCAGTACCGGGACAGTCACACTGACTCGCACCTGCACACACGCCAGCACTGCTCGCTCTTTGAC
GTGTCTCATATGCTGCAGACCAAGATACTTGGTAGTGACCGGGTGAAGCTGATGGAGAGTCTAGTGGTTGGAGACATTGC
AGAGCTAAGACCAAACCAGGGGACACTGTCGCTGTTTACCAACGAGGCTGGAGGCATCTTAGATGACTTGATTGTAACCA
GTACTTCTGAGGGCCACCTGTATGTGGTGTCCAACGCTGGCTGCTGGGAGAAAGATTTGGCCCTCATGCAGGACAAGGTC
AGGGAGCTTCAGAACCAGGGCAGAGATGTGGGCCTGGAGGTGTTGGATAATGCCCTGCTAGCTCTGCAAGGCCCCACTGC
AGCCCAGGTACTACAGGCCGGCGTGGCAGATGACCTGAGGAAACTGCCCTTCATGACCAGTGCTGTGATGGAGGTGTTTG
GCGTGTCTGGCTGCCGTGTGACCCGCTGTGGCTACACAGGAGAGGATGGTGTGGAGATCTCGGTGCCGGTAGCGGGGGCA
GTTCACCTGGCAACAGCTCTTCTGAAAAACCCAGAGGTGAAGCTGGCAGGGCTGGCAGCCAGGGACAGCCTGCGCCTGGA
GGCAGGCCTCTGCCTGTACGGGAATGACATTGATGAACACACTACACCTGTGGAGGGCAGCCTCAGTTGGACACTGGGGA
AGCGCCGCCGAGCTGCTATGGACTTCCCTGGAGCCAAAGTCATTGTTCCCCAGCTGAAGGGCAAGGTGCAGCGGAGGCGT
GTGGGGTTGATGTGTGAGGGGGCCCCCATGCGGGCACACAGTCCCATCCTGAACATGGAGGGTACCAAGATTGGTACTGT
GACTAGTGGCTGCCCCTCGCCCTCTCTGAAGAAGAATGTGGCGATGGGTTATGTGCCCTGCGAGTACAGTCGTCCAGGGA
CAATGCTGCTGGTAGAGGTGCGGCGGAAGCAGCAGATGGCTGTAGTCAGCAAGATGCCCTTTGTGCCCACAAACTACTAT
ACCCTCAAGTGA
ATGCAGAGGGCTGTAAGTGTGGTGGCCCATCTGGGCTCTCGCCTGCAGGCATTCTCCCCGGCCTTGTGTCGTCCATTTAG
TTGCGCACAGGAGGTGCTCCGCCGGACACCGCTGTATGACTTCCACCTGGCCCACGGCGGGAAAATGGTGGCGTTTGCGG
GTTGGAGTCTGCCAGTGCAGTACCGGGACAGTCACACTGACTCGCACCTGCACACACGCCAGCACTGCTCGCTCTTTGAC
GTGTCTCATATGCTGCAGACCAAGATACTTGGTAGTGACCGGGTGAAGCTGATGGAGAGTCTAGTGGTTGGAGACATTGC
AGAGCTAAGACCAAACCAGGGGACACTGTCGCTGTTTACCAACGAGGCTGGAGGCATCTTAGATGACTTGATTGTAACCA
GTACTTCTGAGGGCCACCTGTATGTGGTGTCCAACGCTGGCTGCTGGGAGAAAGATTTGGCCCTCATGCAGGACAAGGTC
AGGGAGCTTCAGAACCAGGGCAGAGATGTGGGCCTGGAGGTGTTGGATAATGCCCTGCTAGCTCTGCAAGGCCCCACTGC
AGCCCAGGTACTACAGGCCGGCGTGGCAGATGACCTGAGGAAACTGCCCTTCATGACCAGTGCTGTGATGGAGGTGTTTG
GCGTGTCTGGCTGCCGTGTGACCCGCTGTGGCTACACAGGAGAGGATGGTGTGGAGATCTCGGTGCCGGTAGCGGGGGCA
GTTCACCTGGCAACAGCTCTTCTGAAAAACCCAGAGGTGAAGCTGGCAGGGCTGGCAGCCAGGGACAGCCTGCGCCTGGA
GGCAGGCCTCTGCCTGTACGGGAATGACATTGATGAACACACTACACCTGTGGAGGGCAGCCTCAGTTGGACACTGGGGA
AGCGCCGCCGAGCTGCTATGGACTTCCCTGGAGCCAAAGTCATTGTTCCCCAGCTGAAGGGCAAGGTGCAGCGGAGGCGT
GTGGGGTTGATGTGTGAGGGGGCCCCCATGCGGGCACACAGTCCCATCCTGAACATGGAGGGTACCAAGATTGGTACTGT
GACTAGTGGCTGCCCCTCGCCCTCTCTGAAGAAGAATGTGGCGATGGGTTATGTGCCCTGCGAGTACAGTCGTCCAGGGA
CAATGCTGCTGGTAGAGGTGCGGCGGAAGCAGCAGATGGCTGTAGTCAGCAAGATGCCCTTTGTGCCCACAAACTACTAT
ACCCTCAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 27 .31 RPM |
| SRP007412_cerebellum | 39 .52 RPM |
| SRP007412_heart | 24 .59 RPM |
| SRP007412_kidney | 56 .75 RPM |
| SRP007412_liver | 31 .43 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000011489 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000003962 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000145020 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000012973 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000050214 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2449 | 69.66 | 78.66 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000013871 retrocopies