Parental gene: | Amt, ENSRNOG00000050214 |
| Aliases: | None |
| Description: | aminomethyltransferase, mitochondrial [Source:RefSeq peptide;Acc:NP_001014026] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 8:116421430..116427436(+) |
>ENSRNOG00000050214
ATGCAGCGGACAGTCAGGGTGGTAGCCCCTCTGGGTTTTCGCCTTCAGGCACAACCCTTGGTCCAGAGTCGTCCATTCAG
TTCTGTACAGGATGGACTCCGCAGGACTCCACTCTATGACTTCCACCTAGCCCATGGAGGGAAAATGGTGGCGTTTGCAG
GGTGGAGTCTGCCTGTGCAATACCGGGACAGTCATGTTGATTCACACCTGCACACACGCCGTCACTGCTCTCTCTTTGAT
GTGTCCCACATGCTACAGACCAAGATATTTGGCTGTGACCGAGTGAGGCTGATGGAGAATATAGTGGTTGGAGACATTGC
GGAACTAAGGCCTAACCAGGGTCATTTTCGGATATTCAGACAGCTTTGGAGAAGCACTATCCCAGCCTTACTCCACTGGG
AGGCCAGAGACCACCGTTTATATTCCCTGACCTCTCATGCTGCTGAGGTGCCAGACCTAGCGAGGTTTCAGGACAAGGTC
AAGGAGTTCCAGAACAGGGGCCTTGATGTAGGCCTGGAGGTGGTAGATAATGCCCTGTTAGCTCTGCAAGGACCCACTGC
AGCACAGGTCTTACAGGCTGGGGTGACAGATGATATGAGGAAACTGCCCTTCATGACCAGTGCTGTGATGGAGGTGTTCG
GTGTGTCTGGCTGTCGTGTGACCCGCTGTGGCTACACAGGAGAGGATGGTGTTGAGATATCAGTGCCAGCGGCAGGAGCA
GTCCACTTGGCCACTGCTCTGCTGAAAAACCCAGAGGTAAAGCTGGCAGGACTAGCAGCCCGAGATAGCCTGCGCCTGGA
GGCTGGCCTCTGTCTGTATGGGAATGACATCGATGAACATACCACACCTGTGGAGGGCAGCCTCAGCTGGACACTGGGAA
AGCGCCGCCGAGTTGCTATGGACTTCCCAGGAGCCAAAATCATCATCCCCCAGCTGAAGGGTGAGGTGCAGAGGCGACGT
GTGGGGTTGATATGCGAAGGGGCTCCAATGAGAGCACACAGTCCTATTTTGAACACAGAAGGCGCAGTGATTGGTACAGT
GACCAGTGGCTGCCCTTCACCCAGCCTGAAGAAGAATGTGGCGATGGGTTATGTGGCCTTCAAGTACAGTCGGCCAGGGA
CACAGCTGCTGGTGGAAGTTCGGCGGAAGCAGCAAATGACGGTGGTTAGCAAAATGCCCTTTGTGCCCACGAAGTACTAT
ACTCTCAAGTGA
ATGCAGCGGACAGTCAGGGTGGTAGCCCCTCTGGGTTTTCGCCTTCAGGCACAACCCTTGGTCCAGAGTCGTCCATTCAG
TTCTGTACAGGATGGACTCCGCAGGACTCCACTCTATGACTTCCACCTAGCCCATGGAGGGAAAATGGTGGCGTTTGCAG
GGTGGAGTCTGCCTGTGCAATACCGGGACAGTCATGTTGATTCACACCTGCACACACGCCGTCACTGCTCTCTCTTTGAT
GTGTCCCACATGCTACAGACCAAGATATTTGGCTGTGACCGAGTGAGGCTGATGGAGAATATAGTGGTTGGAGACATTGC
GGAACTAAGGCCTAACCAGGGTCATTTTCGGATATTCAGACAGCTTTGGAGAAGCACTATCCCAGCCTTACTCCACTGGG
AGGCCAGAGACCACCGTTTATATTCCCTGACCTCTCATGCTGCTGAGGTGCCAGACCTAGCGAGGTTTCAGGACAAGGTC
AAGGAGTTCCAGAACAGGGGCCTTGATGTAGGCCTGGAGGTGGTAGATAATGCCCTGTTAGCTCTGCAAGGACCCACTGC
AGCACAGGTCTTACAGGCTGGGGTGACAGATGATATGAGGAAACTGCCCTTCATGACCAGTGCTGTGATGGAGGTGTTCG
GTGTGTCTGGCTGTCGTGTGACCCGCTGTGGCTACACAGGAGAGGATGGTGTTGAGATATCAGTGCCAGCGGCAGGAGCA
GTCCACTTGGCCACTGCTCTGCTGAAAAACCCAGAGGTAAAGCTGGCAGGACTAGCAGCCCGAGATAGCCTGCGCCTGGA
GGCTGGCCTCTGTCTGTATGGGAATGACATCGATGAACATACCACACCTGTGGAGGGCAGCCTCAGCTGGACACTGGGAA
AGCGCCGCCGAGTTGCTATGGACTTCCCAGGAGCCAAAATCATCATCCCCCAGCTGAAGGGTGAGGTGCAGAGGCGACGT
GTGGGGTTGATATGCGAAGGGGCTCCAATGAGAGCACACAGTCCTATTTTGAACACAGAAGGCGCAGTGATTGGTACAGT
GACCAGTGGCTGCCCTTCACCCAGCCTGAAGAAGAATGTGGCGATGGGTTATGTGGCCTTCAAGTACAGTCGGCCAGGGA
CACAGCTGCTGGTGGAAGTTCGGCGGAAGCAGCAAATGACGGTGGTTAGCAAAATGCCCTTTGTGCCCACGAAGTACTAT
ACTCTCAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 39 .20 RPM |
| SRP017611_kidney | 63 .29 RPM |
| SRP017611_brain | 21 .14 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000011489 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000003962 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000145020 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000012973 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013871 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1397 | 78.80 | 91.32 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000050214 retrocopies