Parental gene: | AMT, ENSCJAG00000003962 |
| Aliases: | None |
| Description: | Aminomethyltransferase [Source:UniProtKB/TrEMBL;Acc:F6PIE6] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 15:25096595..25102550(-) |
>ENSCJAG00000003962
ATGCAGAGGGCTGTAAGTGTGGTGGCCCGTCTGGGCTTTCGCCTGCAGGCATTCTCCCCGGACTTGTGTCGTCCACTCAG
TTTCGCACAGGACTTGCTCCGCAGGACACCGCTCTATGACTTCCACCTGGCCCACGGCGGGAAAATGGTGGTGTTCGCGG
GTTGGAGTCTGCCAGTGCAGTACCGGGACAGTCACACTGACTCGCACCTACACACACGCCAGCACTGCTCGCTCTTTGAT
GTGTCTCATATGCTGCAGACCAAGATATGTGGTAGTGACCGGGTGAAGCTGATGGAGAGTCTAGTGGTTGGAGACATTGC
AGAGCTAAGACCAAACCAGGGGACACTGTCGCTGTTTACCAATGAGGCTGGAGGCATCTTAGATGACTTGATTGTAACCA
ATACTTCTGAGGGGCACCTGTATGTGGTATCCAATGCTGGCTGCTGGGAGAAAGATTTGGCCCTCATGCAGGACAAGGTC
AGGGAGCTTCAGAACCAGGGCAGAGATGTGGGCCTGGAGGTGCTGGATAATGCCCTGCTAGCTCTGCAAGGCCCCACTGC
AGCCCAGGTGCTACAGGCCGGTGTGGCAGATGACCTGAGGAAACTGCCCTTCATGACCAGTGCTGTGATGGAGGTGTTTG
GTGTGTCTGGCTGCCGTGTGACCCGCTGTGGCTACACAGGAGAGGACGGTGTGGAGATCTCGGTCCCAGCAGCGGGGGCA
GTTCACCTGGCAACAGCTCTTCTGCAAGACCCAGAGGTGAAGCTGGCAGGGTTGGCCGCCAGGGATAGCCTGCGCCTGGA
GGCAGGCCTCTGCCTGTATGGGAATGACATTGATGAACACACTACACCTGTGGAGGGCAGCCTCAGTTGGACACTGGGGA
AGCGCCGCCGAGCTGCTATGGACTTCCCTGGAGCCAAGGTCATTGTTCCCCAGCTGAAGGGCAAGGTGCAGCGGAGGCGT
GTGGGCTTGATGTGTGAGGGGGCCCCAATGCGGGCACACAGTCCCATCCTGAACATGGAGGGTACCATGATTGGTACTGT
GACCAGTGGCTGCCCCTCACCCTCTCTGAAGAAGAATGTAGCGATGGGTTACGTGCCCTGCGAGTACAGTCGTCCAGGGA
CAAAGCTGATGGTAGAGGTGCGGCGAAAGCAGCAGATGGCTGTGGTCAGCAAGATGCCCTTTGTGCCCACGAACTATTAT
ACCCTTAAATGA
ATGCAGAGGGCTGTAAGTGTGGTGGCCCGTCTGGGCTTTCGCCTGCAGGCATTCTCCCCGGACTTGTGTCGTCCACTCAG
TTTCGCACAGGACTTGCTCCGCAGGACACCGCTCTATGACTTCCACCTGGCCCACGGCGGGAAAATGGTGGTGTTCGCGG
GTTGGAGTCTGCCAGTGCAGTACCGGGACAGTCACACTGACTCGCACCTACACACACGCCAGCACTGCTCGCTCTTTGAT
GTGTCTCATATGCTGCAGACCAAGATATGTGGTAGTGACCGGGTGAAGCTGATGGAGAGTCTAGTGGTTGGAGACATTGC
AGAGCTAAGACCAAACCAGGGGACACTGTCGCTGTTTACCAATGAGGCTGGAGGCATCTTAGATGACTTGATTGTAACCA
ATACTTCTGAGGGGCACCTGTATGTGGTATCCAATGCTGGCTGCTGGGAGAAAGATTTGGCCCTCATGCAGGACAAGGTC
AGGGAGCTTCAGAACCAGGGCAGAGATGTGGGCCTGGAGGTGCTGGATAATGCCCTGCTAGCTCTGCAAGGCCCCACTGC
AGCCCAGGTGCTACAGGCCGGTGTGGCAGATGACCTGAGGAAACTGCCCTTCATGACCAGTGCTGTGATGGAGGTGTTTG
GTGTGTCTGGCTGCCGTGTGACCCGCTGTGGCTACACAGGAGAGGACGGTGTGGAGATCTCGGTCCCAGCAGCGGGGGCA
GTTCACCTGGCAACAGCTCTTCTGCAAGACCCAGAGGTGAAGCTGGCAGGGTTGGCCGCCAGGGATAGCCTGCGCCTGGA
GGCAGGCCTCTGCCTGTATGGGAATGACATTGATGAACACACTACACCTGTGGAGGGCAGCCTCAGTTGGACACTGGGGA
AGCGCCGCCGAGCTGCTATGGACTTCCCTGGAGCCAAGGTCATTGTTCCCCAGCTGAAGGGCAAGGTGCAGCGGAGGCGT
GTGGGCTTGATGTGTGAGGGGGCCCCAATGCGGGCACACAGTCCCATCCTGAACATGGAGGGTACCATGATTGGTACTGT
GACCAGTGGCTGCCCCTCACCCTCTCTGAAGAAGAATGTAGCGATGGGTTACGTGCCCTGCGAGTACAGTCGTCCAGGGA
CAAAGCTGATGGTAGAGGTGCGGCGAAAGCAGCAGATGGCTGTGGTCAGCAAGATGCCCTTTGTGCCCACGAACTATTAT
ACCCTTAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 9 .73 RPM |
| SRP051959_skeletal_muscle | 7 .99 RPM |
| SRP051959_lymph_node | 8 .33 RPM |
| SRP051959_lung | 9 .78 RPM |
| SRP051959_liver | 7 .97 RPM |
| SRP051959_kidney | 13 .62 RPM |
| SRP051959_heart | 9 .75 RPM |
| SRP051959_colon | 2 .51 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000011489 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000145020 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000012973 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013871 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000050214 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1895 | 87.60 | 61.79 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000003962 retrocopies