Parental gene:

NOP16, ENSCAFG00000016694

Aliases:None
Description:NOP16 nucleolar protein [Source:HGNC Symbol;Acc:26934]
Organism:Dog (Canis familiaris)
Coordinates:4:36938619..36942792(+)


>ENSCAFG00000016694
ATGCCCAAGGCCAAGGGGAAGACCAGGAGACAAAAATTCGGTTACAATGTTAACCGGAAGCGTCTGAACCGGAATGCTCG
ACGGAAAGCAGCGCCACGGATCGAGTGTTCCCACATCCGACATGCCTGGGACCACGCCAAATCCGTGCGGCAGAACCTGG
CCGAGATGGGGTTGGCTGTGGACCCCAACAAGGCGGTGCCCCTCCGAAAGAGAAAGGTGAAGGCCATGGAGGTGGACATA
GAGGAGAGGCCTAAGGAGCTTGTGCGGAAGCCCTATGTGCTCAATGACCTAGAGGCAGAAGCCAGCCTCCCAGAAAAGAA
AGGAAACACACTGTCTCGAGACCTTATTGACTATGTGCGCTACATGGTAGAGAATCACGGGGAGGACTACAAGGCTATGG
CCCGGGACGAGAAGAATTACTATCAAGATACCCCAAAACAGATTCGGAATAAGATCAACGTCTATAGGCGTTTTTACCCA
GCGGAGTGGCAAACCTTCACTGAATCTTTGCAGAAGAATAAGATGGAGGTTGAGTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 8 .65 RPM
SRP017611_brain 8 .42 RPM
SRP017611_kidney 9 .44 RPM
SRP017611_liver 9 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012315 ortholog_one2many 1 retrogene
retro_cjac_2208,
Echinops telfairi ENSETEG00000010391 ortholog_one2many 1 retrogene
retro_etel_1329,
Mustela putorius furo ENSMPUG00000012552 ortholog_one2many 1 retrogene
retro_mputfur_381,
Otolemur garnettii ENSOGAG00000000824 ortholog_one2one 2 retrogenes
retro_ogar_1323, retro_ogar_2299,
Rattus norvegicus ENSRNOG00000017284 possible_ortholog 1 retrogene
retro_rnor_2739,
Sus scrofa ENSSSCG00000029577 ortholog_one2one 1 retrogene
retro_sscr_510,
Ictidomys tridecemlineatus ENSSTOG00000004869 ortholog_one2one 1 retrogene
retro_itri_1124,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1790 94.77 85.96
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2. retro_cfam_1793 73.48 100.00
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Download FASTA sequences of all ENSCAFG00000016694 retrocopies