Parental gene:

CENPV, ENSCAFG00000018019

Aliases:None
Description:centromere protein V [Source:HGNC Symbol;Acc:29920]
Organism:Dog (Canis familiaris)
Coordinates:5:39567970..39583403(+)


>ENSCAFG00000018019
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCGGGAGCGCTG
GGAGACGTTCCAGAAGCGGCAGAGGCTCACCTTCGAGGGCGCCGCCAAGCTGCTGCTGGACACCTTTGAATACCAGGGCC
TGGTGAAGCATACGGGAGGATGCCACTGTGGAGCGGTTCGCTTTGAAGTTTGGGCCTCAGCCGACTTGCACATCTTTGAC
TGCAACTGCAGCATTTGTAAGAAGAAGCAGAATAGACACTTCATTGTCCCGGCTTCTCGCTTCAAGCTCCTGAAGGGAGC
CGAGAGCATAACCACATACACGTTCAACACGCACAAAGCCCAGCACACCTTCTGTAAGAGATGTGGCGTTCAGAGCTTTT
ACACTCCCCGCTCAAACCCTGGAGGCTTCGGGATTGCCCCACACTGCCTTGACGAGGGCACCGTGCGGAGCGTGGTCATT
GAGGAGTTCAATGGCACCGATTGGGAAAAGGCCATGAAGGAGCACAAGACCATCAAGAACATGTCTAAGGAGTGA

Library Parental gene expression (RPM)
SRP017611_brain 4 .37 RPM
SRP017611_kidney 4 .03 RPM
SRP017611_liver 2 .90 RPM
SRP012049_cerebellum 19 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004716 ortholog_one2one 5 retrogenes
retro_amel_1859, retro_amel_1870, retro_amel_1909, retro_amel_1926, retro_amel_924,
Homo sapiens ENSG00000166582 ortholog_one2one 3 retrogenes
retro_hsap_4683, retro_hsap_4833, retro_hsap_4834,
Macropus eugenii ENSMEUG00000002027 ortholog_one2one 1 retrogene
retro_meug_519,
Microcebus murinus ENSMICG00000007166 ortholog_one2one 1 retrogene
retro_mmur_1491,
Mustela putorius furo ENSMPUG00000010146 ortholog_one2one 2 retrogenes
retro_mputfur_1195, retro_mputfur_39,
Nomascus leucogenys ENSNLEG00000014726 ortholog_one2one 1 retrogene
retro_nleu_2709,
Otolemur garnettii ENSOGAG00000029365 ortholog_one2one 1 retrogene
retro_ogar_99,
Pan troglodytes ENSPTRG00000008810 ortholog_one2one 1 retrogene
retro_ptro_3216,
Ictidomys tridecemlineatus ENSSTOG00000012221 ortholog_one2one 2 retrogenes
retro_itri_110, retro_itri_1540,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_2153 67.16 78.82
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2. retro_cfam_2155 67.48 95.29
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Download FASTA sequences of all ENSCAFG00000018019 retrocopies