Parental gene: | CENPV, ENSG00000166582 |
| Aliases: | CENPV, 3110013H01Rik, CENP-V, PRR6, p30 |
| Description: | centromere protein V [Source:HGNC Symbol;Acc:29920] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 17:16245847..16256970(-) |
>ENSG00000166582
ATGCGGCGATCGAGGAGCTCTGCGGCCGCCAAGCTGCGCGGGCAGAAGCGGTCCGGGGCCTCCGCGGCCCCCGCGGCCTC
CGCGGCCGCTGCCTTGGCACCCAGCGCCACCCGCACACGGCGCTCCGCTAGCCAGGCCGGGAGCAAGAGCCAGGCGGTGG
AGAAGCCGCCGTCGGAGAAGCCGCGGCTGAGGCGCTCGTCGCCGCGGGCCCAGGAGGAGGGCCCGGGGGAGCCGCCGCCG
CCTGAGCTGGCGTTGCTCCCGCCACCGCCGCCGCCGCCGCCGACTCCCGCGACCCCGACGTCCTCGGCGTCCAACCTGGA
CCTGGGCGAGCAGCGGGAGCGCTGGGAGACGTTCCAGAAGCGGCAGAAGCTTACCTCCGAGGGTGCCGCCAAGCTCCTGC
TAGACACCTTTGAATACCAGGGCCTGGTGAAGCACACAGGAGGCTGCCACTGTGGAGCAGTTCGTTTTGAAGTTTGGGCC
TCAGCAGACTTGCATATATTTGACTGCAATTGCAGCATTTGCAAGAAGAAGCAGAATAGACACTTCATTGTTCCAGCTTC
TCGCTTCAAGCTCCTGAAGGGAGCTGAGCACATAACGACTTACACGTTCAATACTCACAAAGCCCAGCATACCTTCTGTA
AGAGATGTGGCGTTCAGAGCTTCTATACTCCACGATCAAACCCCGGAGGCTTCGGAATTGCCCCCCACTGCCTGGATGAG
GGCACTGTGCGGAGTATGGTCACTGAGGAATTCAATGGCAGCGATTGGGAGAAGGCCATGAAAGAGCACAAGACCATCAA
GAACATGTCTAAAGAGTGA
ATGCGGCGATCGAGGAGCTCTGCGGCCGCCAAGCTGCGCGGGCAGAAGCGGTCCGGGGCCTCCGCGGCCCCCGCGGCCTC
CGCGGCCGCTGCCTTGGCACCCAGCGCCACCCGCACACGGCGCTCCGCTAGCCAGGCCGGGAGCAAGAGCCAGGCGGTGG
AGAAGCCGCCGTCGGAGAAGCCGCGGCTGAGGCGCTCGTCGCCGCGGGCCCAGGAGGAGGGCCCGGGGGAGCCGCCGCCG
CCTGAGCTGGCGTTGCTCCCGCCACCGCCGCCGCCGCCGCCGACTCCCGCGACCCCGACGTCCTCGGCGTCCAACCTGGA
CCTGGGCGAGCAGCGGGAGCGCTGGGAGACGTTCCAGAAGCGGCAGAAGCTTACCTCCGAGGGTGCCGCCAAGCTCCTGC
TAGACACCTTTGAATACCAGGGCCTGGTGAAGCACACAGGAGGCTGCCACTGTGGAGCAGTTCGTTTTGAAGTTTGGGCC
TCAGCAGACTTGCATATATTTGACTGCAATTGCAGCATTTGCAAGAAGAAGCAGAATAGACACTTCATTGTTCCAGCTTC
TCGCTTCAAGCTCCTGAAGGGAGCTGAGCACATAACGACTTACACGTTCAATACTCACAAAGCCCAGCATACCTTCTGTA
AGAGATGTGGCGTTCAGAGCTTCTATACTCCACGATCAAACCCCGGAGGCTTCGGAATTGCCCCCCACTGCCTGGATGAG
GGCACTGTGCGGAGTATGGTCACTGAGGAATTCAATGGCAGCGATTGGGAGAAGGCCATGAAAGAGCACAAGACCATCAA
GAACATGTCTAAAGAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 11 .74 RPM |
| bodymap2_lung | 6 .00 RPM |
| bodymap2_breast | 5 .82 RPM |
| bodymap2_adipose | 6 .62 RPM |
| bodymap2_adrenal | 10 .97 RPM |
| bodymap2_skeletal_muscle | 6 .07 RPM |
| bodymap2_thyroid | 8 .46 RPM |
| bodymap2_prostate | 8 .90 RPM |
| bodymap2_colon | 6 .32 RPM |
| bodymap2_testis | 19 .95 RPM |
| bodymap2_brain | 10 .20 RPM |
| bodymap2_heart | 2 .97 RPM |
| bodymap2_white_blood_cells | 2 .19 RPM |
| bodymap2_lymph_node | 3 .58 RPM |
| bodymap2_ovary | 17 .12 RPM |
| bodymap2_kidney | 7 .36 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004716 | ortholog_one2one | 5 retrogenes | |
| Canis familiaris | ENSCAFG00000018019 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000002027 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000007166 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000010146 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000014726 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000029365 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000008810 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000012221 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_4683 | 63.78 | 67.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_4833 | 63.64 | 68.38 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_4834 | 63.78 | 67.65 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000166582 retrocopies