Parental gene: | UBL5, ENSCAFG00000032630 |
| Aliases: | None |
| Description: | ubiquitin-like 5 [Source:HGNC Symbol;Acc:13736] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 20:51174537..51175968(-) |
>ENSCAFG00000032630
ATGATCGAGGTTGTTTGCAACGACCGTCTAGGGAAGAAGGTCCGCGTTAAGTGCAACACTGATGACACCATCGGGGACCT
TAAGAAGCTGATCGCAGCCCAAACTGGCACCCGTTGGAACAAGATCGTCCTGAAGAAGTGGTACACGATTTTCAAGGACC
ACGTGTCTTTGGGGGACTATGAAATCCACGATGGGATGAACCTGGAGCTTTATTACCAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012049_cerebellum | 54 .98 RPM |
| SRP017611_brain | 46 .05 RPM |
| SRP017611_kidney | 149 .90 RPM |
| SRP017611_liver | 22 .84 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000012371 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000006384 | ortholog_one2one | 5 retrogenes | |
| Dipodomys ordii | ENSDORG00000006499 | ortholog_one2one | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000005999 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000012892 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000015506 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000027369 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000084786 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000029004 | ortholog_one2one | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000013412 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000020442 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000010974 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000005286 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_801 | 64.06 | 87.67 | Please wait, loading  |
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| 2. | retro_cfam_1482 | 86.30 | 100.00 | Please wait, loading |
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| 3. | retro_cfam_1733 | 97.26 | 100.00 | Please wait, loading |
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| 4. | retro_cfam_1953 | 66.67 | 100.00 | Please wait, loading |
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| 5. | retro_cfam_2125 | 69.74 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSCAFG00000032630 retrocopies