Parental gene:

NECAP1, ENSCHOG00000008087

Aliases:None
Description:NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:24539]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_1065:4542..14022(+)


>ENSCHOG00000008087
ATGGCGGCTGAATCCGAGTATGAGTCCGTCCTGTGTGTGAAGCCAGATGTCAGCGTCTACCGTATTCCGCCTCGGGCCTC
CAACCGCGGCTACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGCTCTTTGCTCAAGCACCAGTAGAACAATATCCTGGCATT
GCTGTGGAAACAGTGACAGATTCCAGCCGCTACTTTGTAATTAGGATCCAGGATGGCACTGGGCGTAGTGCTTTTATTGG
CATTGGCTTCACAGATCGGGGTGATGCCTTCGACTTTAATGTCTCCTTGCAAGATCATTTCAAGTGGGTAAAGCAGGAAT
CTGAGATTTCCAAAGAATCTCAGGAAATGGACACTCGTCCCAAGTTAGATCTGGGTTTCAAGGAAGGACAGACCATCAAG
TTGAGTATTGGGAACATTACAACCAAGAAAGGAGGTGCTTCTAAGCCCAGGACCTCAGGAGCTGGGGGCCTAAGCTTACT
CCCACCCCCACCTGGAGGCAAAGTCACTATTCCCCCACCATCTTCCTCAGTTGCCATCAGTAATCACGTCACCCCACCAC
CCATTCCAAAATCTAATCATGGAGGCAGTGATGCAGATATCCTTTTAGATTTGGATTCTCCTGCTCCTGTCACGACACCA
GCAACAGCTCCAGTTACGGCAGGCAACTACTTGTGTGGAGACTTCACCACTGCATCCAACTCTGTTTCAAACCAGGCACC
ACAGCCATCCAACTGGGTCCAGTTCTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016989 ortholog_one2one 1 retrogene
retro_amel_1016,
Canis familiaris ENSCAFG00000013930 ortholog_one2one 1 retrogene
retro_cfam_780,
Dasypus novemcinctus ENSDNOG00000014778 ortholog_one2one 2 retrogenes
retro_dnov_613, retro_dnov_986,
Homo sapiens ENSG00000089818 ortholog_one2one 1 retrogene
retro_hsap_3839,
Gorilla gorilla ENSGGOG00000010233 ortholog_one2one 1 retrogene
retro_ggor_2585,
Loxodonta africana ENSLAFG00000002979 ortholog_one2one 1 retrogene
retro_lafr_632,
Mustela putorius furo ENSMPUG00000016742 ortholog_one2one 1 retrogene
retro_mputfur_361,
Nomascus leucogenys ENSNLEG00000001743 ortholog_one2one 1 retrogene
retro_nleu_1974,
Oryctolagus cuniculus ENSOCUG00000004309 ortholog_one2one 1 retrogene
retro_ocun_606,
Otolemur garnettii ENSOGAG00000006358 ortholog_one2one 1 retrogene
retro_ogar_3442,
Pongo abelii ENSPPYG00000004238 ortholog_one2one 1 retrogene
retro_pabe_3059,
Pan troglodytes ENSPTRG00000023277 ortholog_one2one 1 retrogene
retro_ptro_2615,
Rattus norvegicus ENSRNOG00000009236 ortholog_one2one 1 retrogene
retro_rnor_1806,
Ictidomys tridecemlineatus ENSSTOG00000010153 ortholog_one2one 2 retrogenes
retro_itri_1107, retro_itri_740,
Tursiops truncatus ENSTTRG00000014260 ortholog_one2one 1 retrogene
retro_ttru_1035,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_1692 75.00 74.18
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2. retro_chof_1818 78.87 51.64
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3. retro_chof_1913 82.19 52.73
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Download FASTA sequences of all ENSCHOG00000008087 retrocopies