Parental gene: | ENSCJAG00000001720 |
| Aliases: | None |
| Description: | Annexin [Source:UniProtKB/TrEMBL;Acc:F6XT66] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 12:50660730..50703596(+) |
>ENSCJAG00000001720
ATGTCATACCCAGGCTATCCCCCAACAGGCTACCCACCTTTCCCTGGATATCCTCCTGCAGGTCAGGAGTCATCTTTTCC
CCCTTCTGGTCAGTATCCTTTTCCTAGTGGCTTTCCTCCAATGGGGGGAGGTGCCTACCCACAAGTGCCAAGTGGTGGCT
ATCCAGGAGCTGGAGGCTACCCTGCGCCTGGAGGTTATCCAGCCCCTGGAGGCTATCCTGGTGCCCCACAGCCAGGGGGA
GCTCCATCCTATCCGGGAGTTCCTCCAGGCCATGGATTTGGAGTCCCACCAAGTGGAGCAGGCTTTTCTGGCTATCCACA
GCCACCCTCACAATCTTATGGAGGTGGTCCGGCACAGGTCCCACTACCTGGTGGCTTTCCTGGAGGACAGATGCCTTCTC
AGTATCCTGGAGGACAGCCTACTTACCCTAGTCAGATCAGTACAGAATCTTTTCCTTCCTATCCTGTTTTCTCTCATGTT
TCTTTGGATTGTAGCAGTGAACCTGCCGCAGTGACTCAGGGCGCTCAAGGAACTATCCGACCAGTTGCCAACTTCGATGC
TATGAGAGATGCAGAAATTCTCCGTAAGGCAATGAAGGGTTTTGGGACAGACGAACAGGCGATTGTGGATGTGGTGGCCA
ACCGTTCCAATGATCAGAGGCAAAAAATTAAAGCAGCATTTAAGACCTCGTATGGCAAGGATTTAATCAAAGATCTCAAA
TCAGAGTTAAGTGGAAATATGGAAGAACTGATCCTAGCCCTATTCATGCCTCCTACATATTACGATGCCTGGAGCTTACG
GAAAGCAATGCAGGGAGCAGGAACTCAGGAACGTGTATTGATTGAAATTTTGTGCACGAGAACAAATCAGGAAATCCGAG
AAATTGTCAGATGTTATCAGTCAGAATTTGGACGAGACCTTGAAAAGGACATTAGGTCAGATACATCAGGACATTTTGAA
CGCTTACTTGTGTCCATGTGCCAGGGAAATCGTGATGAAAACCAGAGTGTAAACCACCAAATGGCTCAGGAAGATGCTCA
GCGTCTCTATCAAGCTGGCGAGGGGAGACTAGGGACTGATGAATCTTGCTTTAACATGATCCTTGCCACGAGAAGCTTTC
CTCAGCTAAGAGCTACAATGGAGGCTTATTCCAGGATGGCTAATCGAGATTTGTTAAGCAGTGTGAGCCGTGAGTTTTCC
GGATATGTGGAAAGTGGTTTGAAGACCATCTTGCAGTGTGCCCTGAACCGCCCTGCCTTCTTTGCTGAGAGGCTCTACTA
TGCTATGAAAGGTGCTGGTACAGATGACTCCACCTTGGTCAGGATTGTGGTCACTCGAAGTGAGATTGATCTTGTACAAA
TAAAACAAATGTTCGCTCAGATGTATCAGAAGACCCTGGGCACAATGATTGCAGGTGACACGAGTGGAGATTACCGAAGA
CTTCTTCTGGCTATTGTGGGCCAGTAG
ATGTCATACCCAGGCTATCCCCCAACAGGCTACCCACCTTTCCCTGGATATCCTCCTGCAGGTCAGGAGTCATCTTTTCC
CCCTTCTGGTCAGTATCCTTTTCCTAGTGGCTTTCCTCCAATGGGGGGAGGTGCCTACCCACAAGTGCCAAGTGGTGGCT
ATCCAGGAGCTGGAGGCTACCCTGCGCCTGGAGGTTATCCAGCCCCTGGAGGCTATCCTGGTGCCCCACAGCCAGGGGGA
GCTCCATCCTATCCGGGAGTTCCTCCAGGCCATGGATTTGGAGTCCCACCAAGTGGAGCAGGCTTTTCTGGCTATCCACA
GCCACCCTCACAATCTTATGGAGGTGGTCCGGCACAGGTCCCACTACCTGGTGGCTTTCCTGGAGGACAGATGCCTTCTC
AGTATCCTGGAGGACAGCCTACTTACCCTAGTCAGATCAGTACAGAATCTTTTCCTTCCTATCCTGTTTTCTCTCATGTT
TCTTTGGATTGTAGCAGTGAACCTGCCGCAGTGACTCAGGGCGCTCAAGGAACTATCCGACCAGTTGCCAACTTCGATGC
TATGAGAGATGCAGAAATTCTCCGTAAGGCAATGAAGGGTTTTGGGACAGACGAACAGGCGATTGTGGATGTGGTGGCCA
ACCGTTCCAATGATCAGAGGCAAAAAATTAAAGCAGCATTTAAGACCTCGTATGGCAAGGATTTAATCAAAGATCTCAAA
TCAGAGTTAAGTGGAAATATGGAAGAACTGATCCTAGCCCTATTCATGCCTCCTACATATTACGATGCCTGGAGCTTACG
GAAAGCAATGCAGGGAGCAGGAACTCAGGAACGTGTATTGATTGAAATTTTGTGCACGAGAACAAATCAGGAAATCCGAG
AAATTGTCAGATGTTATCAGTCAGAATTTGGACGAGACCTTGAAAAGGACATTAGGTCAGATACATCAGGACATTTTGAA
CGCTTACTTGTGTCCATGTGCCAGGGAAATCGTGATGAAAACCAGAGTGTAAACCACCAAATGGCTCAGGAAGATGCTCA
GCGTCTCTATCAAGCTGGCGAGGGGAGACTAGGGACTGATGAATCTTGCTTTAACATGATCCTTGCCACGAGAAGCTTTC
CTCAGCTAAGAGCTACAATGGAGGCTTATTCCAGGATGGCTAATCGAGATTTGTTAAGCAGTGTGAGCCGTGAGTTTTCC
GGATATGTGGAAAGTGGTTTGAAGACCATCTTGCAGTGTGCCCTGAACCGCCCTGCCTTCTTTGCTGAGAGGCTCTACTA
TGCTATGAAAGGTGCTGGTACAGATGACTCCACCTTGGTCAGGATTGTGGTCACTCGAAGTGAGATTGATCTTGTACAAA
TAAAACAAATGTTCGCTCAGATGTATCAGAAGACCCTGGGCACAATGATTGCAGGTGACACGAGTGGAGATTACCGAAGA
CTTCTTCTGGCTATTGTGGGCCAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 66 .53 RPM |
| SRP051959_skeletal_muscle | 41 .71 RPM |
| SRP051959_lymph_node | 49 .45 RPM |
| SRP051959_lung | 48 .48 RPM |
| SRP051959_liver | 49 .82 RPM |
| SRP051959_kidney | 58 .28 RPM |
| SRP051959_heart | 50 .15 RPM |
| SRP051959_colon | 71 .73 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000014749 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000013143 | ortholog_one2many | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000013001 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000007136 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000012433 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_860 | 97.32 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1288 | 83.00 | 53.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_2174 | 93.58 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000001720 retrocopies