Parental gene:

TARDBP, ENSCJAG00000002381

Aliases:None
Description:TAR DNA binding protein [Source:HGNC Symbol;Acc:11571]
Organism:Marmoset (Callithrix jacchus)
Coordinates:7:45610460..45623289(+)


>ENSCJAG00000002381
ATGTCTGAATATATTCGGGTAACCGAAGATGAGAACGATGAACCCATTGAAATACCATCGGAAGATGATGGGACCGTGCT
GCTGTCCACGGTTACAGCCCAGTTTCCAGGGGCCTGTGGGCTTCGCTACAGGAATCCAGTGTCTCAATGTATGAGAGGTG
TCCGGCTGGTGGAAGGAATTCTGCATGCCCCCGATGCTGGCTGGGGAAATCTGGTGTATGTTGTCAACTATCCCAAAGAT
AACAAAAGAAAAATGGATGAGACAGATGCTTCATCAGCAGTGAAAGTGAAAAGAGCAGTCCAGAAAACATCCGATTTAAT
AGTGTTGGGTCTCCCATGGAAAACAACTGAACAGGACCTGAAAGACTATTTTAGTACCTTTGGAGAAGTTCTTATGGTGC
AGGTCAAGAAAGATCTTAAGACTGGTCATTCAAAGGGGTTTGGCTTTGTTCGTTTTACGGAATATGAAACACAGGTGAAA
GTAATGTCACAGCGGCATATGATAGATGGACGGTGGTGTGACTGTAAACTTCCTAATTCTAAGCAAAGTGCAGATGAGCC
TTTGAGAAGCAGAAAAGTGTTTGTGGGGCGCTGTACAGAGGACATGACTGAGGACGAGCTGCGGCAGTTCTTCTCCCAGT
ACGGGGAGGTGATGGATGTCTTCATCCCCAAGCCGTTCAGGGCCTTTGCCTTTGTAACATTTGCAGATGATCAGATTGCG
CAATCTCTTTGTGGCGAGGACTTGATCATTAAAGGAATCAGCGTTCACATATCCAATGCCGAACCTAAGCACAATAGCAA
TAGACAGTTAGAAAGAAGTGGAAGATTTGGTGGTAATCCAGGTGGCTTTGGGAATCAGGGTGGATTTGGTAATAGTAGAG
GGGGTGGAGCTGGTTTGGGAAACAATCAAGGTAGTAATATGGGTGGTGGGATGAACTTTGGCGCATTCAGCATTAATCCA
GCCATGATGGCTGCAGCCCAGGCAGCGCTACAGAGCAGTTGGGGTATGATGGGCATGTTAGCCAGCCAGCAGAACCAGTC
AGGCCCATCGGGTAATAACCAAAGCCAAGGCAACATGCAGAGGGAGCCAAACCAGGCCTTTGGTTCTGGAAATAACTCTT
ATAGTGGTTCTAATTCTGGTGCAGCAATTGGTTGGGGATCAGCATCAAATGCAGGGTCGGGTAGTGGTTTTAATGGAGGC
TTTGGCTCAAGCATGGATTCTAAGTCTTCTGGCTGGGGAATGTAG

Library Parental gene expression (RPM)
SRP051959_colon 33 .19 RPM
SRP051959_heart 44 .92 RPM
SRP051959_kidney 43 .53 RPM
SRP051959_liver 32 .49 RPM
SRP051959_lung 56 .89 RPM
SRP051959_lymph_node 58 .40 RPM
SRP051959_skeletal_muscle 28 .76 RPM
SRP051959_spleen 54 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000008531 ortholog_one2one 1 retrogene
retro_dnov_2262,
Homo sapiens ENSG00000120948 ortholog_one2one 2 retrogenes
retro_hsap_1209, retro_hsap_3637,
Macaca mulatta ENSMMUG00000007456 ortholog_one2many 1 retrogene
retro_mmul_1847,
Mus musculus ENSMUSG00000041459 ortholog_one2one 1 retrogene
retro_mmus_1958,
Nomascus leucogenys ENSNLEG00000009512 possible_ortholog 2 retrogenes
retro_nleu_201, retro_nleu_819,
Pongo abelii ENSPPYG00000001894 ortholog_one2many 1 retrogene
retro_pabe_1008,
Pan troglodytes ENSPTRG00000000136 ortholog_one2one 2 retrogenes
retro_ptro_2460, retro_ptro_828,
Sus scrofa ENSSSCG00000023126 possible_ortholog 1 retrogene
retro_sscr_652,
Drosophila melanogaster FBgn0025790 possible_ortholog 1 retrogene
retro_dmel_17,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_525 77.88 51.69
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_cjac_2457 67.03 65.22
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000002381 retrocopies