Parental gene:

TARDBP, ENSPTRG00000000136

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:11144923..11157855(+)


>ENSPTRG00000000136
ATGTCTGAATATATTCGGGTAACCGAAGATGAGAACGATGAGCCCATTGAAATACCATCGGAAGACGATGGGACGGTGCT
GCTCTCCACGGTTACAGCCCAGTTTCCAGGGGCGTGTGGGCTTCGCTACAGGAATCCAGTGTCTCAGTGTATGAGAGGTG
TCCGGCTGGTAGAAGGAATTCTGCATGCCCCCGATGCTGGCTGGGGAAATCTGGTGTATGTTGTCAACTATCCAAAAGAT
AACAAAAGAAAAATGGATGAGACAGATGCTTCATCGGCAGTGAAAGTGAAAAGAGCAGTCCAGAAAACATCCGATTTAAT
AGTGTTGGGTCTCCCATGGAAAACAACCGAACAGGACCTGAAAGAGTATTTTAGTACCTTTGGAGAAGTTCTTATGGTGC
AGGTCAAGAAAGATCTTAAGACTGGTCATTCAAAGGGGTTTGGCTTTGTTCGTTTTACGGAATATGAAACACAAGTGAAA
GTAATGTCACAGCGACATATGATAGATGGACGATGGTGTGACTGTAAACTTCCTAATTCTAAGCAAAGCCAAGATGAGCC
TTTGAGAAGCAGAAAAGTGTTTGTGGGGCGCTGTACAGAGGACATGACTGAGGATGAGCTGCGGGAGTTCTTCTCTCAGT
ACGGGGATGTGATGGATGTCTTCATCCCCAAGCCATTCAGGGCCTTTGCCTTTGTTACATTTGCAGATGATCAGATTGCG
CAGTCTCTTTGTGGAGAGGACTTGATCATTAAAGGAATCAGCGTTCATATATCCAATGCCGAACCTAAGCACAATAGCAA
TAGACAGTTAGAAAGAAGTGGAAGATTTGGTGGTAATCCAGGTGGCTTTGGGAATCAGGGTGGATTTGGTAATAGCAGAG
GGGGTGGAGCTGGTTTGGGAAACAATCAAGGTAGTAATATGGGTGGTGGGATGAACTTCGGTGCGTTCAGCATTAATCCA
GCCATGATGGCTGCCGCCCAGGCAGCACTACAGAGCAGTTGGGGTATGATGGGCATGTTAGCCAGCCAGCAGAACCAGTC
AGGCCCATCAGGTAATAACCAAAACCAAGGCAACATGCAGAGGGAGCCAAACCAGGCCTTCGGTTCTGGAAATAACTCTT
ATAGCGGCTCTAATTCTGGTGCAGCAATTGGTTGGGGATCAGCATCCAATGCAGGGTCGGGCAGTGGTTTTAATGGAGGC
TTTGGCTCAAGCATGGATTCTAAGTCTTCTGGCTGGGGAATGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 107 .44 RPM
SRP007412_cerebellum 197 .99 RPM
SRP007412_heart 100 .03 RPM
SRP007412_kidney 120 .64 RPM
SRP007412_liver 95 .62 RPM
SRP007412_testis 160 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002381 ortholog_one2one 2 retrogenes
retro_cjac_2457, retro_cjac_525,
Dasypus novemcinctus ENSDNOG00000008531 ortholog_one2one 1 retrogene
retro_dnov_2262,
Homo sapiens ENSG00000120948 ortholog_one2one 2 retrogenes
retro_hsap_1209, retro_hsap_3637,
Macaca mulatta ENSMMUG00000007456 ortholog_one2one 1 retrogene
retro_mmul_1847,
Mus musculus ENSMUSG00000041459 ortholog_one2one 1 retrogene
retro_mmus_1958,
Nomascus leucogenys ENSNLEG00000009512 possible_ortholog 2 retrogenes
retro_nleu_201, retro_nleu_819,
Pongo abelii ENSPPYG00000001894 ortholog_one2one 1 retrogene
retro_pabe_1008,
Sus scrofa ENSSSCG00000023126 possible_ortholog 1 retrogene
retro_sscr_652,
Drosophila melanogaster FBgn0025790 possible_ortholog 1 retrogene
retro_dmel_17,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_828 87.18 65.46
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2. retro_ptro_2460 71.53 64.98
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Download FASTA sequences of all ENSPTRG00000000136 retrocopies