Parental gene:

ENSCJAG00000005579

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:6:104892040..104906767(-)


>ENSCJAG00000005579
ATGAATGTTGGAGTCGCCCACAGTGAAGTGAATCCAAATACCCGTGTCATGAACAGTCGGGGTATGTGGCTGACATATGC
ATTGGGAGTTGGCTTGCTTCATATTGTCTTACTCAGCATTCCCTTCTTCAGTGTTCCTGTTGCTTGGACTTTAACAAATA
TTATACATAATCTGGGGATGTATGTATTTTTGCATGCAGTGAAAGGAACACCTTTCGAAACTCCCGACCAGGGTAAAGCA
AGACTCCTAACTCATTGGGAACAGCTGGATTATGGAGTACAGTTTACATCTTCACGGAAGTTTTTCACAATTTCTCCAAT
AATTCTATATTTTCTGGCAAGTTTCTATACGAAGTATGATTCAACTCACTTCATCCTAAACACAGCTTCTCTCCTGAGTG
TGCTAATTCCCAAAATGCCACAACTACATGGTGTTCGGATCTTTGGAATTAATAAGTATTGA

Library Parental gene expression (RPM)
SRP051959_colon 12 .14 RPM
SRP051959_heart 17 .98 RPM
SRP051959_kidney 16 .06 RPM
SRP051959_liver 17 .59 RPM
SRP051959_lung 14 .01 RPM
SRP051959_lymph_node 16 .07 RPM
SRP051959_skeletal_muscle 15 .77 RPM
SRP051959_spleen 18 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000128699 ortholog_one2many 1 retrogene
retro_hsap_645,
Gorilla gorilla ENSGGOG00000015259 ortholog_one2many 1 retrogene
retro_ggor_565,
Loxodonta africana ENSLAFG00000007769 ortholog_one2many 1 retrogene
retro_lafr_411,
Myotis lucifugus ENSMLUG00000014339 ortholog_one2many 1 retrogene
retro_mluc_2318,
Macaca mulatta ENSMMUG00000014316 ortholog_one2many 1 retrogene
retro_mmul_2432,
Nomascus leucogenys ENSNLEG00000006625 ortholog_one2many 1 retrogene
retro_nleu_730,
Pongo abelii ENSPPYG00000013017 ortholog_one2many 2 retrogenes
retro_pabe_570, retro_pabe_571,
Pan troglodytes ENSPTRG00000012736 ortholog_one2many 1 retrogene
retro_ptro_469,
Sus scrofa ENSSSCG00000016044 ortholog_one2many 1 retrogene
retro_sscr_247,
Tupaia belangeri ENSTBEG00000012942 ortholog_many2many 1 retrogene
retro_tbel_10,
Tursiops truncatus ENSTTRG00000005240 ortholog_one2many 2 retrogenes
retro_ttru_1846, retro_ttru_770,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2962 65.04 78.43
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Download FASTA sequences of all ENSCJAG00000005579 retrocopies