RetrogeneDB ID: | retro_ttru_770 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_3361:234697..235159(+) | ||
Located in intron of: | ENSTTRG00000011864 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ORMDL1 | ||
Ensembl ID: | ENSTTRG00000005240 | ||
Aliases: | None | ||
Description: | ORM1-like 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:16036] |
Percent Identity: | 96.75 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MNVGVAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSI-PFFSVPVAWTLTNVIHNLGMYVFLHAVKG |
MNVG.AHSEVNPNT.VMNSRGMWLTYALGVGLLHIVLLS..PFFSVPVAWTLTNVIHNLGMYVFLHAVKG | |
Retrocopy | MNVGAAHSEVNPNTHVMNSRGMWLTYALGVGLLHIVLLSVLPFFSVPVAWTLTNVIHNLGMYVFLHAVKG |
Parental | TPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYDPTHFILNTASLLSVLIPKM |
TPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFY.KYDPTHFILNTASLLSVLIPKM | |
Retrocopy | TPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYMKYDPTHFILNTASLLSVLIPKM |
Parental | PQLHGVRIFGINKY |
PQLHGVRIFGINKY | |
Retrocopy | PQLHGVRIFGINKY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000005579 | 1 retrocopy | |
Homo sapiens | ENSG00000128699 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000015259 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000007769 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000014339 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000014316 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000006625 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000013017 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000012736 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000016044 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000012942 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000005240 | 2 retrocopies |
retro_ttru_1846, retro_ttru_770 ,
|