Parental gene:

SNAPC5, ENSCJAG00000007484

Aliases:None
Description:small nuclear RNA activating complex, polypeptide 5, 19kDa [Source:HGNC Symbol;Acc:15484]
Organism:Marmoset (Callithrix jacchus)
Coordinates:10:8889315..8896674(-)


>ENSCJAG00000007484
ATGCTGAGCCGGCTTCAGGAACTCCGCAAAGAGGAGGAGACGCTGCTGCGGTTGAAGGCGGCCCTGCACGACCAGCTGAA
CCGCCTCAAGGTTGAAGAATTAGCCCTCCAATCAATGATCAGTTCTAGAAGAGGGGATGAGATGCTGTCTTCTCAAACTG
TACCTGAACAGTCACATGATATGTTGGTGCATGTAGACAATGAAGCATCAATCAACCAAACGACACTGGAGTTGAGCACA
AAGAGTCATGTGACAGAAGAGGAGGAGGAGGAAGAGGAAGAAGAATCAGATTCCTAA

Library Parental gene expression (RPM)
SRP051959_spleen 3 .55 RPM
SRP051959_skeletal_muscle 3 .80 RPM
SRP051959_lymph_node 3 .20 RPM
SRP051959_lung 2 .88 RPM
SRP051959_liver 1 .84 RPM
SRP051959_kidney 4 .33 RPM
SRP051959_heart 4 .05 RPM
SRP051959_colon 2 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000017304 ortholog_one2one 1 retrogene
retro_cfam_1063,
Dasypus novemcinctus ENSDNOG00000006689 ortholog_one2one 1 retrogene
retro_dnov_1203,
Gorilla gorilla ENSGGOG00000003693 ortholog_one2one 1 retrogene
retro_ggor_2398,
Macropus eugenii ENSMEUG00000003990 ortholog_one2many 1 retrogene
retro_meug_1590,
Macaca mulatta ENSMMUG00000016841 ortholog_one2one 1 retrogene
retro_mmul_1815,
Mus musculus ENSMUSG00000032398 ortholog_one2one 1 retrogene
retro_mmus_702,
Nomascus leucogenys ENSNLEG00000012935 ortholog_one2one 1 retrogene
retro_nleu_2325,
Oryctolagus cuniculus ENSOCUG00000008791 ortholog_one2one 1 retrogene
retro_ocun_1059,
Rattus norvegicus ENSRNOG00000010156 ortholog_one2one 1 retrogene
retro_rnor_1087,
Ictidomys tridecemlineatus ENSSTOG00000009201 ortholog_one2one 1 retrogene
retro_itri_1582,
Tupaia belangeri ENSTBEG00000014333 ortholog_one2many 1 retrogene
retro_tbel_68,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2314 71.43 78.57
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Download FASTA sequences of all ENSCJAG00000007484 retrocopies