Parental gene:

RBMS2, ENSCJAG00000010803

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:9:45339175..45417546(+)


>ENSCJAG00000010803
ATGCTGCTATCCGTGACTTCCAGGCCTGGGATTTCGACTTTGGGTTACAGTAGAAACAACAAGAAGCCATATGTGTCATT
GGCTCAGCAGATGGCACCACCTAGCCCAAGCAACAGTACCCCTAACAGCAGCAGTGGAAGCAATGGAAATGACCAGCTGA
GCAAAACCAACCTATACATCCGAGGATTGCAGCCAGGCACTACTGACCAAGATCTTGTCAAGCTGTGTCAGCCATATGGC
AAGATTGTTTCCACTAAGGCCATACTGGACAAGACCACAAACAAATGCAAAGGCTATGGCTTTGTAGATTTTGACAGCCC
TTCAGCAGCACAGAAAGCTGTAACAGCACTGAAGGCCAGCGGTGTACAGGCACAGATGGCAAAGCAACAGGAACAGGACC
CCACAAATTTATACATCTCAAACCTCCCACTGTCAATGGATGAGCAGGAACTGGAGGGGATGCTGAAGCCCTTTGGCCAG
GTTATCTCCACCCGTATCCTTCGAGACACCAGTGGGACCAGCAGAGGGGTTGGCTTTGCAAGGATGGAATCCACAGAGAA
GTGTGAAGCCATCATCACCCACTTTAATGGAAAATATATTAAGACACCCCCTGGAGTACCAGCCCCATCCGATCCCTTGC
TTTGCAAATTTGCTGATGGTGGGCCAAAGAAACGACAGAACCAAGGAAAATTTGTGCAAAATGGACGGGCCTGGCCAAGG
AATGGAGACATGGGTAGCATGGCCTTGACCTATGACCCCACCACGTCTCTTCAGAATGGGTTTTACCCAGCCCCTTATAA
CATCACCCCCAACAGGATGCTTGCTCAGTCTGCACTCTCCCCATACCTTTCCTCTTCCGTGTCTTCGTATCAGGTACCTA
ACCCATCTTGGATGCACCACCATTCATACCTCATGCAACCTTCAGGTTCAGTTCTGACACCAGGGATGGACCATCCTATT
TCTCTCCAGCCAGCCTCCATGATGGGACCTCTTACCCAGCAACTGGGCCACCTCTCCCTCAGCAGCACAGGCACGGTAAA
AGCAAGGCATACCTGTGTAATACTCTTCAGGATAATTACTGCTTATATGCCGACGGCTGCAGCTCTGCAAGGAGCTTACA
TCTCCCAGTACGCCCCGGTGCCTTCTTCCAGTGTTTCAGTCGAGGTAAGTGTGTTATCATTTCTTCGGGTTACGGTAGCT
GCTATGGCACAGGAGAGCAGCAGCCAGCAGAACCAAGTGGCAATGGACACGCCCTCAGAGCATGGGGTCTATTCTTTCCA
GTTCAACAAGTAA

Library Parental gene expression (RPM)
SRP051959_spleen 14 .05 RPM
SRP051959_skeletal_muscle 5 .70 RPM
SRP051959_lymph_node 6 .05 RPM
SRP051959_lung 35 .41 RPM
SRP051959_liver 3 .40 RPM
SRP051959_kidney 9 .12 RPM
SRP051959_heart 15 .38 RPM
SRP051959_colon 8 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004054 ortholog_one2one 1 retrogene
retro_amel_454,
Callithrix jacchus ENSCJAG00000002512 other_paralog 3 retrogenes
retro_cjac_214, retro_cjac_2722, retro_cjac_284,
Callithrix jacchus ENSCJAG00000014861 within_species_paralog 1 retrogene
retro_cjac_1040,
Callithrix jacchus ENSCJAG00000015833 other_paralog 5 retrogenes
retro_cjac_1586, retro_cjac_2571, retro_cjac_3218, retro_cjac_4039, retro_cjac_41,
Homo sapiens ENSG00000076067 ortholog_one2one 1 retrogene
retro_hsap_1143,
Myotis lucifugus ENSMLUG00000000530 ortholog_one2one 1 retrogene
retro_mluc_1093,
Mus musculus ENSMUSG00000040043 ortholog_one2one 1 retrogene
retro_mmus_1530,
Pan troglodytes ENSPTRG00000005104 ortholog_one2one 1 retrogene
retro_ptro_778,
Pteropus vampyrus ENSPVAG00000007616 ortholog_one2one 2 retrogenes
retro_pvam_1429, retro_pvam_695,
Rattus norvegicus ENSRNOG00000003076 ortholog_one2one 1 retrogene
retro_rnor_1374,
Sus scrofa ENSSSCG00000000402 ortholog_one2one 1 retrogene
retro_sscr_546,
Tursiops truncatus ENSTTRG00000002117 ortholog_one2one 1 retrogene
retro_ttru_715,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1022 96.13 82.56
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Download FASTA sequences of all ENSCJAG00000010803 retrocopies