Parental gene: | PTS, ENSCJAG00000012437 |
| Aliases: | None |
| Description: | 6-pyruvoyltetrahydropterin synthase [Source:HGNC Symbol;Acc:9689] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 11:9727418..9735439(+) |
>ENSCJAG00000012437
ATGAGCGCGGTGGGTGGCGGCCGTCGTCCCAAGGCGCAGGTGTCCCGCGGCATCTCCTTCAGCGCGAGCCACCGGCTGCA
CAGTAAGTTTCTAAGTGAGGAAGAAAACTTGAAGCTGTTTGGGAAATGCAGCAATCCAAATGGCCATGGGCACAATTATA
AAGTTGTGGTGACAGTACATGGACAGATTGACCCTGCTACGGGAATGGTTATGAATTTGACTGATCTCAAGAAACATATG
GAGGAGGCAATTATGCAGCCCCTTGATCATAAGAACCTGGATCTGGATGTGCCGTACTTTGCAGATGTGGTGAGCACGAC
TGAAAATGTAGCTGTTTATATCTGGGACAACCTCCAGAAAGTTCTTCCTGTAGGAGTTCTTTATAAAGTAAAAGTGTATG
AAACTGACAATAATATTGTCGTTTATAAAGGAGAATAG
ATGAGCGCGGTGGGTGGCGGCCGTCGTCCCAAGGCGCAGGTGTCCCGCGGCATCTCCTTCAGCGCGAGCCACCGGCTGCA
CAGTAAGTTTCTAAGTGAGGAAGAAAACTTGAAGCTGTTTGGGAAATGCAGCAATCCAAATGGCCATGGGCACAATTATA
AAGTTGTGGTGACAGTACATGGACAGATTGACCCTGCTACGGGAATGGTTATGAATTTGACTGATCTCAAGAAACATATG
GAGGAGGCAATTATGCAGCCCCTTGATCATAAGAACCTGGATCTGGATGTGCCGTACTTTGCAGATGTGGTGAGCACGAC
TGAAAATGTAGCTGTTTATATCTGGGACAACCTCCAGAAAGTTCTTCCTGTAGGAGTTCTTTATAAAGTAAAAGTGTATG
AAACTGACAATAATATTGTCGTTTATAAAGGAGAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 2 .35 RPM |
| SRP051959_skeletal_muscle | 1 .75 RPM |
| SRP051959_lymph_node | 1 .55 RPM |
| SRP051959_lung | 2 .28 RPM |
| SRP051959_liver | 11 .42 RPM |
| SRP051959_kidney | 8 .54 RPM |
| SRP051959_heart | 2 .86 RPM |
| SRP051959_colon | 1 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000013 | possible_ortholog | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000014823 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000008145 | possible_ortholog | 2 retrogenes | |
| Homo sapiens | ENSG00000150787 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000015255 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007299 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000017191 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000003880 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000004288 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2534 | 87.62 | 71.72 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2853 | 77.52 | 88.28 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000012437 retrocopies