Parental gene:

NMT1, ENSCJAG00000012649

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:5:78902268..78944334(+)


>ENSCJAG00000012649
ATGGCGGACGAGAGTGAGACAGCAGTGAAGCCGCCGACACCTCCGCTGCCGCAGATGATGGAAGGGAACGGGAACGGCCA
TGAGCACTGCAGCGATTGCGAGAATGAGGAGGACAACAGCTACAACCGGGGCAGTTTACCCTCGCCCCAAGAAGAGACTG
GAAAGCAGAAGAAATGGAAAAAAAGTAAAAATAAAAAGAAAGAAAAAGGCAGTGAGACAGAGTCAACCCAGGATCAGCCT
GTGAAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGCCATTGAGCTGTTTTCAGTGGGTCAGGGACC
TGCCAAAACCATGGAGGAGGCTAGCAAGCGAAGCTACCAGTTCTGGGATACGCAGCCCGTCCCCAAGCTGGGTGAAGTGG
TGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAACATCCGCCAGGAGCCCTACACCCTGCCTCAGGGCTTCACCTGG
GATGCCTTGGACCTGGGTGACCGAGGTGTGCTGAAAGAACTGTACACCCTCCTGAATGAGAACTATGTGGAAGATGATGA
CAACATGTTCCGATTTGATTATTCCCCAGAGTTTCTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCCCAGTGGCACT
GTGGGGTTCGAGTGGTCTCAAGCCGGAAATTGGTTGGGTTCATTAGTGCCATACCAGCAAACATCCATATCTATGACACA
GAGAAGAAGATGGTGGAGATCAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTGGCTCCAGTCCTGATCCG
AGAGATCACCAGGCGGGTTCATCTGGAGGGCATCTTCCAGGCTGTTTACACTGCCGGGGTGGTACTACCAAAGCCTGTTG
GCACCTGCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGAAGTTCTCCCACCTGAGCAGAAATATG
ACCATGCAGCGCACCATGAAGCTGTACCGACTGCCAGAGACTCCCAAGACAGCTGGGCTTCGGCCAATGGAAAAAAAGGA
CATTCCAGTAGTGCACCAGCTCCTCACCAGGTACTTGAAGCAGTTTCACCTCACGCCAGTCATGAGCCAGGAGGAGGTGG
AGCACTGGTTCTACCCCCAGGAGAACATCATCGACACTTTTGTGGTGGAGAACGCAAACGGAGAGGTGACGGATTTCCTG
AGCTTTTATACGCTGCCCTCCACCATCATGAACCATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTTTCTACAATGT
TCACACCCAGACCCCTCTTCTAGACCTCATGAGCGACGCCCTTGTTCTCGCCAAAATGAAAGGGTTTGATGTGTTCAATG
CACTGGATCTCATGGAGAACAAAACCTTCTTGGAGAAGCTCAAGTTTGGAATAGGGGACGGCAACCTGCAGTATTACCTT
TACAACTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGGCTGGTGCTACAATAA

Library Parental gene expression (RPM)
SRP051959_spleen 23 .84 RPM
SRP051959_skeletal_muscle 39 .94 RPM
SRP051959_lymph_node 24 .38 RPM
SRP051959_lung 21 .39 RPM
SRP051959_liver 29 .65 RPM
SRP051959_kidney 20 .77 RPM
SRP051959_heart 24 .96 RPM
SRP051959_colon 16 .51 RPM



Species Parental gene accession Homology type Retrogenes number
Microcebus murinus ENSMICG00000016650 ortholog_one2one 2 retrogenes
retro_mmur_1526, retro_mmur_715,
Otolemur garnettii ENSOGAG00000012938 ortholog_one2one 1 retrogene
retro_ogar_1822,
Tursiops truncatus ENSTTRG00000006270 ortholog_one2one 1 retrogene
retro_ttru_561,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1366 92.35 65.66
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Download FASTA sequences of all ENSCJAG00000012649 retrocopies