Parental gene:

NT5C, ENSCJAG00000014578

Aliases:None
Description:5', 3'-nucleotidase, cytosolic [Source:HGNC Symbol;Acc:17144]
Organism:Marmoset (Callithrix jacchus)
Coordinates:5:124346888..124348461(-)


>ENSCJAG00000014578
ATGGCGCGGCGCGTACGCGTGCTGGTGGACATGGACGGCGTCCTGGCTGACTTCGAGACCGGCCTCCTGCGGGGCTTTCG
CGACCGTTTCCCCGGGGAGCCGCACGTGCCGCTGGAGCAGCGCCGCGGCTTCCTGGCCCGCGAGCAGTACCGCGCCCTGC
GGCCCGACCTGGCGGACAAAGTGGCCAGTGTGTACGAAGCCCCAGGCTTTTTCCTGGACCTGGAGCCCATCCCGGGGGCC
TTGGACGCCGTGCGGGAGATGAACGACCTGCCGGACACGGAGGTCTTCATCTGCACCAGTCCCCTGCTGAAGTACGACCA
CTGTGTGGGTGAGAAGTACCGCTGGGTGGAGCAGCACCTGGGGCCCCAGTTCCTAGAGCGAATTATCCTGACAAGGGACA
AGACGGTGGTCTTGGGGGACCTGCTCATTGATGACAAGGACACAATTCGAGGCCATGAGGAGACCCCAAGCTGGGAGCAC
ATCTTGTTCACCTGCTGCCACAATCGGCACCTGGTCCTGCCCCCAACAAGGAGACGGCTGCTCTCCTGGAGTGACAACTG
GAGGGAGATCTTAGACAGCAAGCGAGGAGCTGCGCAGAGGGAATGA

Library Parental gene expression (RPM)
SRP051959_spleen 7 .31 RPM
SRP051959_skeletal_muscle 8 .47 RPM
SRP051959_lymph_node 11 .62 RPM
SRP051959_lung 7 .60 RPM
SRP051959_liver 9 .05 RPM
SRP051959_kidney 6 .88 RPM
SRP051959_heart 4 .39 RPM
SRP051959_colon 5 .59 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009175 ortholog_one2one 1 retrogene
retro_amel_1684,
Felis catus ENSFCAG00000031408 ortholog_one2one 2 retrogenes
retro_fcat_1016, retro_fcat_606,
Homo sapiens ENSG00000125458 ortholog_one2one 2 retrogenes
retro_hsap_1441, retro_hsap_1442,
Gorilla gorilla ENSGGOG00000004740 ortholog_one2one 2 retrogenes
retro_ggor_1061, retro_ggor_1109,
Microcebus murinus ENSMICG00000017488 ortholog_one2one 1 retrogene
retro_mmur_1088,
Mustela putorius furo ENSMPUG00000013985 ortholog_one2one 1 retrogene
retro_mputfur_1352,
Nomascus leucogenys ENSNLEG00000000601 ortholog_one2one 2 retrogenes
retro_nleu_1083, retro_nleu_1416,
Pongo abelii ENSPPYG00000008619 ortholog_one2one 1 retrogene
retro_pabe_1195,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_810 59.85 66.67
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Download FASTA sequences of all ENSCJAG00000014578 retrocopies