Parental gene: | ENSCJAG00000016105 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 10:63900678..64021899(+) |
>ENSCJAG00000016105
ATGGCAAAACTTGGCGTTCACAGAATCCTTCTTGTGGCTATTTCTCTGACAAAGTGTTTGGAAAGTACAAAACTGCTGGC
AGACCTTAAAAAATGTGGCGACTTGGAATGTGAAACTTTAATAAGCAGAGTCTCAGCCATGAGAGATTACAGAGGACCAG
ACTGCCGATACCTGAACTTCACTAAGGGAGAAGAGATATCTGTTTATGTTAAACTTGCAGGAGAAAGAGAAGATTTGTGG
GCAGGAAGTAAAGGAAAGGAGTTTGGATACTTTCCGAGAGATGCAGTCCAGATTGAAGAGGTGTTCATATCTGAGGAGAT
TCAGATATCTACTAAAGAATCTGACTTTCTTTGCCTTCTTGGAGTGAGCTATACATTTGACAATGAAGATAGTGAATTAA
ACAGTGATTATGGTGAAAATACACATCCTTATGAAGAAGATAAAGATGAAAAATCTAGTGTACATGAAAGTGATATTCAG
ATAGAACCTGAATTTTATGCAACTTATGTAAGTACTTTGTTTGAAGACCAGTTTCCAGCATTAGAGGCTCCCGAAGAGAT
CAGAAGTACCAGTAAATCAAAACACCGGGAAGAAGTAGTTGCTGAAAGTGTGGAACAGGATCATATTCCAGAAGTGCATG
TCCTACCATCTTCAGCTGCACCTGGAGTCAAAGAATGGTTTGGATTGGTAAGAGAACAAGCTGAAGAGAAGGCTTTTGAA
TCTGTTATTGAACCTATACAAGGAAGTGCATTTCGAAGTAGAAAAATAGCAGTGGAAGATGAGAATGACCTAGAGGAATT
AAATAATATTGAGCCTCAAACAGAACATCAGCAAGAATCTGAATCAGAAATTGCTTCAGTGCCAAAGACACAGTCTGAAC
TAGCATCTGAGTCAGAGCACATTCCCAAACCTCAACCCACTGGTTGGTTTGGTGGTGGATTTACAAGTTATTTAGGTTTT
GGAGATGCGGATACAGGGCTGGAATTATTAGCAGAAGAAAGCAATCCACCACTACAAGATTTTCCCAATTCTATATCATC
TGATGAAGAAGCCACAGTTCCATGTACAAAAATATTAACAGAAAAAGAAGACACAATCACTAATGACAGCTTGAGTCTCA
AGGCAAGTTGGTTTGATTTTGGTTTTGTTATGCTAGGTTTTGCATATGCCAAGGAAGATAAAATTATGTTAGATAACAGG
AAAAATGAAGAAGATGGTGGGGCAGATGAACACGAACAACCTCCAACAAGTGAATTTGATGCTGAAAAAGAACAAGAAAT
AGAAATGATAAAAATTATGGAAACAGAAGATGAAATAGACAAGAAATCAGTCTTAGAAAAAACAGAGGAATCTGATACCT
TCCCATATTTGAAAAGGTTCTTGTATAATTTTGACAACCCTTGGAACTTCCAGAACATTCCAAAGAAAAAAGAATTGTCA
TTTCCCAAACAGATACTGGATCAAAATAATGTAATGGAAAATGAAGAAAGAGAAGAATTTTCCGTTGACAATTATCCCAC
AGATAATACAAAAGTTATGATGTTTGAAAGTTCATACATTCAGTCAGAAGATGCTTCTGAATTTCAGATTCTGAAATACT
TATTCCAAATTGATGTTTATGATTTCATGAATTCTGCATTATCACCAATTGTAATTCTTACAGAAAGGGTTGTGGCAGCA
CTGCCTGAAGGTATGAGACCAGATTCTAATCCTTATGGTTTTCCATGGGAATTGGTGATATGTGCAGCTGTTGTTGGATT
TTGTGCTGTTCTCTTTTTTTTGTGGAGAAGTTTTAGATCGGTTAGGAGTCGGCTATATGTGGGAAGAGAGAAAAAGCTTG
CTGTAATGCTTTCTGGACTAATTGAAGAAAAATGTAAACTACTTGAAAAATTTAGCCTTGTTCAAAAAGAGTATGAAGGC
TATGAAGTAGAGTCATCTTTAAAGGATGCCAGCTTTGAGAAGGAGGCAACAGAAGCACAAAGTTTGGAGGCAACCTGTGA
AAAGCTGAACAGGTCCAATTCTGAACTGGAAGATGAAATACTCTGTCTAGAAAAAGAGTTAAAAGAAGAGAAATCTAAAC
ATTCTGAGCAAGATGAATTGATGGCAGATATTTCAAAAAGGATACAGTCTCTAGAAGATGAGTCAAAATCCATCAAATCA
CAAGTAGCTGAAGCCAAAATGACCTTCAAGATATTTCAAATGAATGAAGAAAGACTGAGGATAGCAATAAAAGATGCTTT
GAATGAAAATTCTCAACTTCAGGAAAGCCAGAAACAGCTTTTACAAGAAGCTGAAGTATGGAAAGAACAAGTGAGTGAAC
TTAATAAACAGAAAATAACATTTGAAGACTCCAAAGTACATGCAGAAGAAGTTCTAAATGATAAAGAAAATCACATCAAG
ATTCTGACTGAACGCTTGATAAAGATGAAAGATTGGGCCGCTATACTTGGAGAAGAGATAACGGATGATGATAACTTGGA
ATTAGAAATGAACAGTGAATCAGAAAATGGTGCTTACTTAGATAATCCTCCAAAAGGAGCATTGAAGAAACTGATTCATG
CTGCTAAGTTAAATGCTTCTTTAAAAACCTTAGAAGGAGAAAGAAACCAAATATATATTCAGTTATCTGATGTTGATAAG
ACAAAGGAAGAGCTTACAGAGCATATTAAAAATCTTCAGACTGAACAAGCATCTTTGCAGTCAGAAAACACACATTTTGA
AAGTGAGAATCAGAAGCTTCAACAGAAACTTAAAGTAATGACTGAATTATATCAAGAAAATGAAATGAAACTCCACAGGA
AATTAACAGTAGAGGAAAATTTCCGGTTAGAGAAAGAAGAAAAACTTTGTAAAGTAGACGAAAAGATCAGCCATGCCACT
GAAGAGCTGGAGACCTATAGAAAGCGAGCCAAAGATCTTGAAGAAGAATTGGAGAGAACTATTCATTCTTATCAAGGGCA
GATTATTTCCCATGAGAAAAAAGCACATGATAATTGGTTGGCAGCTCGAACTGCTGAAAGAAACCTCAATGATTTAAGGA
AAGAAAATGCTCACAACAGACAAAAATTAACTGAAACAGAGTTGAAATTTGAACTTTTAGAAAAAGATCCTTACGCTCTT
GATGTTCCAAATACAGCATTTGGCAGAGAGCATTCCCCATATGGTCCCTCACCATTGGGTCGGCCTTCATCTGAAACGAG
AGCTTTTCTCTCTCCTCCAACTTTGTTGGAGGGTCCACTCAGACTCTCACCTTTGCTTCCAGGGGGAGGAGGAAGAGGCC
CAAGAGGCCCGGGGAATCCTCTGGACCATCAGATTACCAACGAAAGAGGAGAATCAAGCTGTGATAGGTTAACTGATCCT
CATAGGGCTCCTTCTGACACTGGGTCCCTGTCACCTCCATGGGAACAGGACCGTAGGTTGATGTTTCCTCCACCAGAAGG
ACAATCATATCCTGATTCAGCTCTTCATCCACAAAGGCAAGACAGATTTTATTCTAATTCTGGTAGACTGTCTGGACCAG
CAGAACTCAGAAGTTTTAATATGCCTTCTTTGGATAAAATGGATGGGTCAGTGCCTTCAGAAATGGAATCCAGTAGAAAT
GATACCAAAGATGATCTTGGTAATTTAAATGTGCCTGATGCATCTCTCCCCGCTGAAAATGAAGCAGCTGCCCCTGGCTT
TGTTCCTCCACCTCTTGCTCCTATGAGAGGTCCATTGTTTCCAGTGGATACAAGGGGCCCCTTCGTGAGAAGAGGACCTC
CTTTCCCCCTACCTCCTCCAGGAACCATGTTTGGAGCTTCTCGAGATTATTTTCCACCAAGGGATTTCCCAGGTCCACCA
CATGCTCCATTTGCAATGAGAAATGTCTATCCACCGAGGGGTTTTCCTTCTTACCTTCCCCCAAGACCTGGATTTTTACC
CCCGCCCCCGAATTCTGAAGGTAGAAGTGAGTTCCCTTCAGGGTTGATTGCACCTTCGAATGAGCCTGCTCCTGAACATC
CAGAACCACAGCGAGAAACCTGA
ATGGCAAAACTTGGCGTTCACAGAATCCTTCTTGTGGCTATTTCTCTGACAAAGTGTTTGGAAAGTACAAAACTGCTGGC
AGACCTTAAAAAATGTGGCGACTTGGAATGTGAAACTTTAATAAGCAGAGTCTCAGCCATGAGAGATTACAGAGGACCAG
ACTGCCGATACCTGAACTTCACTAAGGGAGAAGAGATATCTGTTTATGTTAAACTTGCAGGAGAAAGAGAAGATTTGTGG
GCAGGAAGTAAAGGAAAGGAGTTTGGATACTTTCCGAGAGATGCAGTCCAGATTGAAGAGGTGTTCATATCTGAGGAGAT
TCAGATATCTACTAAAGAATCTGACTTTCTTTGCCTTCTTGGAGTGAGCTATACATTTGACAATGAAGATAGTGAATTAA
ACAGTGATTATGGTGAAAATACACATCCTTATGAAGAAGATAAAGATGAAAAATCTAGTGTACATGAAAGTGATATTCAG
ATAGAACCTGAATTTTATGCAACTTATGTAAGTACTTTGTTTGAAGACCAGTTTCCAGCATTAGAGGCTCCCGAAGAGAT
CAGAAGTACCAGTAAATCAAAACACCGGGAAGAAGTAGTTGCTGAAAGTGTGGAACAGGATCATATTCCAGAAGTGCATG
TCCTACCATCTTCAGCTGCACCTGGAGTCAAAGAATGGTTTGGATTGGTAAGAGAACAAGCTGAAGAGAAGGCTTTTGAA
TCTGTTATTGAACCTATACAAGGAAGTGCATTTCGAAGTAGAAAAATAGCAGTGGAAGATGAGAATGACCTAGAGGAATT
AAATAATATTGAGCCTCAAACAGAACATCAGCAAGAATCTGAATCAGAAATTGCTTCAGTGCCAAAGACACAGTCTGAAC
TAGCATCTGAGTCAGAGCACATTCCCAAACCTCAACCCACTGGTTGGTTTGGTGGTGGATTTACAAGTTATTTAGGTTTT
GGAGATGCGGATACAGGGCTGGAATTATTAGCAGAAGAAAGCAATCCACCACTACAAGATTTTCCCAATTCTATATCATC
TGATGAAGAAGCCACAGTTCCATGTACAAAAATATTAACAGAAAAAGAAGACACAATCACTAATGACAGCTTGAGTCTCA
AGGCAAGTTGGTTTGATTTTGGTTTTGTTATGCTAGGTTTTGCATATGCCAAGGAAGATAAAATTATGTTAGATAACAGG
AAAAATGAAGAAGATGGTGGGGCAGATGAACACGAACAACCTCCAACAAGTGAATTTGATGCTGAAAAAGAACAAGAAAT
AGAAATGATAAAAATTATGGAAACAGAAGATGAAATAGACAAGAAATCAGTCTTAGAAAAAACAGAGGAATCTGATACCT
TCCCATATTTGAAAAGGTTCTTGTATAATTTTGACAACCCTTGGAACTTCCAGAACATTCCAAAGAAAAAAGAATTGTCA
TTTCCCAAACAGATACTGGATCAAAATAATGTAATGGAAAATGAAGAAAGAGAAGAATTTTCCGTTGACAATTATCCCAC
AGATAATACAAAAGTTATGATGTTTGAAAGTTCATACATTCAGTCAGAAGATGCTTCTGAATTTCAGATTCTGAAATACT
TATTCCAAATTGATGTTTATGATTTCATGAATTCTGCATTATCACCAATTGTAATTCTTACAGAAAGGGTTGTGGCAGCA
CTGCCTGAAGGTATGAGACCAGATTCTAATCCTTATGGTTTTCCATGGGAATTGGTGATATGTGCAGCTGTTGTTGGATT
TTGTGCTGTTCTCTTTTTTTTGTGGAGAAGTTTTAGATCGGTTAGGAGTCGGCTATATGTGGGAAGAGAGAAAAAGCTTG
CTGTAATGCTTTCTGGACTAATTGAAGAAAAATGTAAACTACTTGAAAAATTTAGCCTTGTTCAAAAAGAGTATGAAGGC
TATGAAGTAGAGTCATCTTTAAAGGATGCCAGCTTTGAGAAGGAGGCAACAGAAGCACAAAGTTTGGAGGCAACCTGTGA
AAAGCTGAACAGGTCCAATTCTGAACTGGAAGATGAAATACTCTGTCTAGAAAAAGAGTTAAAAGAAGAGAAATCTAAAC
ATTCTGAGCAAGATGAATTGATGGCAGATATTTCAAAAAGGATACAGTCTCTAGAAGATGAGTCAAAATCCATCAAATCA
CAAGTAGCTGAAGCCAAAATGACCTTCAAGATATTTCAAATGAATGAAGAAAGACTGAGGATAGCAATAAAAGATGCTTT
GAATGAAAATTCTCAACTTCAGGAAAGCCAGAAACAGCTTTTACAAGAAGCTGAAGTATGGAAAGAACAAGTGAGTGAAC
TTAATAAACAGAAAATAACATTTGAAGACTCCAAAGTACATGCAGAAGAAGTTCTAAATGATAAAGAAAATCACATCAAG
ATTCTGACTGAACGCTTGATAAAGATGAAAGATTGGGCCGCTATACTTGGAGAAGAGATAACGGATGATGATAACTTGGA
ATTAGAAATGAACAGTGAATCAGAAAATGGTGCTTACTTAGATAATCCTCCAAAAGGAGCATTGAAGAAACTGATTCATG
CTGCTAAGTTAAATGCTTCTTTAAAAACCTTAGAAGGAGAAAGAAACCAAATATATATTCAGTTATCTGATGTTGATAAG
ACAAAGGAAGAGCTTACAGAGCATATTAAAAATCTTCAGACTGAACAAGCATCTTTGCAGTCAGAAAACACACATTTTGA
AAGTGAGAATCAGAAGCTTCAACAGAAACTTAAAGTAATGACTGAATTATATCAAGAAAATGAAATGAAACTCCACAGGA
AATTAACAGTAGAGGAAAATTTCCGGTTAGAGAAAGAAGAAAAACTTTGTAAAGTAGACGAAAAGATCAGCCATGCCACT
GAAGAGCTGGAGACCTATAGAAAGCGAGCCAAAGATCTTGAAGAAGAATTGGAGAGAACTATTCATTCTTATCAAGGGCA
GATTATTTCCCATGAGAAAAAAGCACATGATAATTGGTTGGCAGCTCGAACTGCTGAAAGAAACCTCAATGATTTAAGGA
AAGAAAATGCTCACAACAGACAAAAATTAACTGAAACAGAGTTGAAATTTGAACTTTTAGAAAAAGATCCTTACGCTCTT
GATGTTCCAAATACAGCATTTGGCAGAGAGCATTCCCCATATGGTCCCTCACCATTGGGTCGGCCTTCATCTGAAACGAG
AGCTTTTCTCTCTCCTCCAACTTTGTTGGAGGGTCCACTCAGACTCTCACCTTTGCTTCCAGGGGGAGGAGGAAGAGGCC
CAAGAGGCCCGGGGAATCCTCTGGACCATCAGATTACCAACGAAAGAGGAGAATCAAGCTGTGATAGGTTAACTGATCCT
CATAGGGCTCCTTCTGACACTGGGTCCCTGTCACCTCCATGGGAACAGGACCGTAGGTTGATGTTTCCTCCACCAGAAGG
ACAATCATATCCTGATTCAGCTCTTCATCCACAAAGGCAAGACAGATTTTATTCTAATTCTGGTAGACTGTCTGGACCAG
CAGAACTCAGAAGTTTTAATATGCCTTCTTTGGATAAAATGGATGGGTCAGTGCCTTCAGAAATGGAATCCAGTAGAAAT
GATACCAAAGATGATCTTGGTAATTTAAATGTGCCTGATGCATCTCTCCCCGCTGAAAATGAAGCAGCTGCCCCTGGCTT
TGTTCCTCCACCTCTTGCTCCTATGAGAGGTCCATTGTTTCCAGTGGATACAAGGGGCCCCTTCGTGAGAAGAGGACCTC
CTTTCCCCCTACCTCCTCCAGGAACCATGTTTGGAGCTTCTCGAGATTATTTTCCACCAAGGGATTTCCCAGGTCCACCA
CATGCTCCATTTGCAATGAGAAATGTCTATCCACCGAGGGGTTTTCCTTCTTACCTTCCCCCAAGACCTGGATTTTTACC
CCCGCCCCCGAATTCTGAAGGTAGAAGTGAGTTCCCTTCAGGGTTGATTGCACCTTCGAATGAGCCTGCTCCTGAACATC
CAGAACCACAGCGAGAAACCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 23 .21 RPM |
| SRP051959_skeletal_muscle | 20 .96 RPM |
| SRP051959_lymph_node | 24 .68 RPM |
| SRP051959_lung | 25 .96 RPM |
| SRP051959_liver | 139 .82 RPM |
| SRP051959_kidney | 127 .75 RPM |
| SRP051959_heart | 22 .82 RPM |
| SRP051959_colon | 25 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000026514 | possible_ortholog | 2 retrogenes | |
| Homo sapiens | ENSG00000150527 | ortholog_one2many | 3 retrogenes | |
| Homo sapiens | ENSG00000258941 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000011990 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004121 | ortholog_one2many | 10 retrogenes | |
| Pongo abelii | ENSPPYG00000005768 | ortholog_one2one | 9 retrogenes | |
| Pan troglodytes | ENSPTRG00000006297 | ortholog_one2many | 10 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000015890 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_921 | 66.43 | 54.14 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1747 | 69.60 | 64.55 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_2711 | 71.18 | 64.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_3217 | 75.41 | 74.88 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000016105 retrocopies