Parental gene: | ENSNLEG00000004121 |
| Aliases: | None |
| Description: | None |
| Organism: | Gibbon (Nomascus leucogenys) |
| Coordinates: | GL397292.1:15728803..15803478(+) |
>ENSNLEG00000004121
ATGGAGGAGCCCGGGGCTACCCCTCAACCGTATTTGGGGCTGGTCCTGGAGGAGCTACGCAGGGTTGTGGCAGCACTGCC
TGAAGGTATGAGACCAAATTCTAATCCTTATGGTTTTCCGTGGGAATTGGTGATATGTGCAGCTGTTGTTGGATTTTTTG
CTGTTCTCTTTTTTTTGTGGAGAAGTTTTAGATCGGTTAGGAGTCGGCTTTATGTGGGAAGAGAGAAAAAGCTTGCTGTA
ATGCTTTCTGGACTAATTGAAGAAAAAAGTAAACTACTTGAAAAATTTAGCCTTGTTCAAAAAGAGTATGAAGGCTATGA
AGTAGAGTCATCTTTAAAGGATGCCAGCTTTGAGAAGGAGGCAACAGAAGCACAAAGTTTGGAGGTAAAAAATCAAATGG
CCACCTGTGAAAAGCTGAACAGGTCCAATTCTGAACTTGAGGATGAAATACTCTGTCTGGAAAAAGAGTTAAAAGAAGAG
AAATGCAAACATTCTGAACAAGATGAATTGATGGCGGATATTTCAAAAAGGATACAGTCTCTAGAAGATGAGTCAAAATC
CCTCAAATCACAAGTAGCTGAAGCCAAAATGACCTTCAAGATATTTCAAATGAATGAAGAACGACTGAAGATAGCAATAA
AAGATGCTTTGACTGAAAATTCTGAACTTCAGGAAAGCCAGAAACAGCTTTTGCAAGATGCTGAAGTGTGGAAAGAACAA
GTGAGTGAACTTAATAAACAGAAAGTAACATTTGAAGACTCCACAGTACACGCAGAACAAGTTCTGAATGATAAAGAAAA
TCACATCAAGACTCTGACTGAACGCTTGCTAAAGATGAAAGATTGGGCTGCTATGCTTGGAGAAGACATAACGGATGATG
ATAACTTGGAATTAGAAATGAACAGTGAATCGGAAAATGGTGCTTACTTAGATAATCCTCCAAAAGGAGCTTTGAAGAAA
CTGATTCATGCTGCTAAGTTAAATGCTTCTTTAAAAACCTTAGAAGGAGAAAGAAACCAAATTTATATTCAGTTATCTGA
AGTTGATACAACAAAGGAAGAGCTTACAGAGCATATTAAAAATCTTCAGACTGAACAAGCATCTTTGCAGTCAGAAAACA
CACATTTTGAAAATGAGAATCAGAAGCTTCAACAGAAACTTAAAGTAATGACTGAATTATATCAAGAAAATGAAATGAAA
CTCCACAGGAAATTAACAGTAGAGGAAAATTATCGGTTAGAGAAAGAAGAGAAACTTTCTAAAGTAGATGAAAAGATCAG
CCATGCCACTGAAGAGCTGGAGACCTATAGAAAGCGAGCCAAAGATCTTGAAGAAGAATTGGAGAGAACTATTCATTCTT
ATCAAGGGCAGATTATTTCCCATGAGAAAAAAGCACATGAGAATTGGTTGGCAGCTCGGAATGCTGAAAGAAACCTCAAT
GATTTAAGGAAAGAAAATGCTCACAACAGACAAAAATTAACTGAAACAGAGCTTAAATTTGAACTTTTAGAAAAAGATCC
TTATGCACTTGATGTTCCAAATACAGCATTTGGCAGAGAGCATTCCCCATATGGTCCCTCACCATTGGGTTGGCCTGCAT
CTGAAACAAGAGCTTTTCTCTCTCCTCCAACTTTGTTGGAGGGTCCACTCAGACTCTCACCTTTGCTTCCAGGGGGAGGA
GGAAGAGGCTCACGAGGCCCAGGGAATCCTGTGGACCATCAGATTACCAATGAAAGAGGAGAATCAAGCTGTGATAGGTT
AACCGATCCTCATAGGGCTCCCTCTGACACTGGGTCTCTGTCACCTCCATGGGAACAGGACCGTAGGATGATGTTTCCTC
CACCAGGACAATCATATCCTGATTCAGCCCTTCCTCCACAAAGGCAAGACAGATTTTGTTCTAATTCTGGTAGACTGTCT
GGACCAGCAGAACTCAGAAGTTTTAATATGCCTTCTTTGGATAAAATGGATGGGTCAATGCCTTCAGAAATGGAACCCAG
TAGAAATGATAGCAAAGATGATCTTGGTAATTTAAATGTGCCTGATTCATCTCTCCCTGCTGAAAATGAAGCCACTGGCC
CTGGCTTTGTTCCTCCACCTCTTGCTCCAATCAGAGGTCCATTGTTTCCAGTGGATACAAGAGGCCCATTCTTGAGAAGA
GGACCTCCTTTCCCCCCACCTCCTCCAGGAGCCATGTTTGGAGCTTCTCGAGATTATTTTCCACCAAGGGATTTCCCAGG
TCCACCACATGCTCCATTTGCAATGAGAAATGTCTATCCACCAAGGGGTTTTCCTCCTTACCTTCCCCCAAGACCTGGAT
TTTTCCCCCCACCCCCACATTCTGAAGGTAGGAGTGAGTTCCCTTCAGGTTTGATTCCACCTTCAAATGAGCCTGCTACT
GAACATCCAGAACGACAGCAAGAAACCTGA
ATGGAGGAGCCCGGGGCTACCCCTCAACCGTATTTGGGGCTGGTCCTGGAGGAGCTACGCAGGGTTGTGGCAGCACTGCC
TGAAGGTATGAGACCAAATTCTAATCCTTATGGTTTTCCGTGGGAATTGGTGATATGTGCAGCTGTTGTTGGATTTTTTG
CTGTTCTCTTTTTTTTGTGGAGAAGTTTTAGATCGGTTAGGAGTCGGCTTTATGTGGGAAGAGAGAAAAAGCTTGCTGTA
ATGCTTTCTGGACTAATTGAAGAAAAAAGTAAACTACTTGAAAAATTTAGCCTTGTTCAAAAAGAGTATGAAGGCTATGA
AGTAGAGTCATCTTTAAAGGATGCCAGCTTTGAGAAGGAGGCAACAGAAGCACAAAGTTTGGAGGTAAAAAATCAAATGG
CCACCTGTGAAAAGCTGAACAGGTCCAATTCTGAACTTGAGGATGAAATACTCTGTCTGGAAAAAGAGTTAAAAGAAGAG
AAATGCAAACATTCTGAACAAGATGAATTGATGGCGGATATTTCAAAAAGGATACAGTCTCTAGAAGATGAGTCAAAATC
CCTCAAATCACAAGTAGCTGAAGCCAAAATGACCTTCAAGATATTTCAAATGAATGAAGAACGACTGAAGATAGCAATAA
AAGATGCTTTGACTGAAAATTCTGAACTTCAGGAAAGCCAGAAACAGCTTTTGCAAGATGCTGAAGTGTGGAAAGAACAA
GTGAGTGAACTTAATAAACAGAAAGTAACATTTGAAGACTCCACAGTACACGCAGAACAAGTTCTGAATGATAAAGAAAA
TCACATCAAGACTCTGACTGAACGCTTGCTAAAGATGAAAGATTGGGCTGCTATGCTTGGAGAAGACATAACGGATGATG
ATAACTTGGAATTAGAAATGAACAGTGAATCGGAAAATGGTGCTTACTTAGATAATCCTCCAAAAGGAGCTTTGAAGAAA
CTGATTCATGCTGCTAAGTTAAATGCTTCTTTAAAAACCTTAGAAGGAGAAAGAAACCAAATTTATATTCAGTTATCTGA
AGTTGATACAACAAAGGAAGAGCTTACAGAGCATATTAAAAATCTTCAGACTGAACAAGCATCTTTGCAGTCAGAAAACA
CACATTTTGAAAATGAGAATCAGAAGCTTCAACAGAAACTTAAAGTAATGACTGAATTATATCAAGAAAATGAAATGAAA
CTCCACAGGAAATTAACAGTAGAGGAAAATTATCGGTTAGAGAAAGAAGAGAAACTTTCTAAAGTAGATGAAAAGATCAG
CCATGCCACTGAAGAGCTGGAGACCTATAGAAAGCGAGCCAAAGATCTTGAAGAAGAATTGGAGAGAACTATTCATTCTT
ATCAAGGGCAGATTATTTCCCATGAGAAAAAAGCACATGAGAATTGGTTGGCAGCTCGGAATGCTGAAAGAAACCTCAAT
GATTTAAGGAAAGAAAATGCTCACAACAGACAAAAATTAACTGAAACAGAGCTTAAATTTGAACTTTTAGAAAAAGATCC
TTATGCACTTGATGTTCCAAATACAGCATTTGGCAGAGAGCATTCCCCATATGGTCCCTCACCATTGGGTTGGCCTGCAT
CTGAAACAAGAGCTTTTCTCTCTCCTCCAACTTTGTTGGAGGGTCCACTCAGACTCTCACCTTTGCTTCCAGGGGGAGGA
GGAAGAGGCTCACGAGGCCCAGGGAATCCTGTGGACCATCAGATTACCAATGAAAGAGGAGAATCAAGCTGTGATAGGTT
AACCGATCCTCATAGGGCTCCCTCTGACACTGGGTCTCTGTCACCTCCATGGGAACAGGACCGTAGGATGATGTTTCCTC
CACCAGGACAATCATATCCTGATTCAGCCCTTCCTCCACAAAGGCAAGACAGATTTTGTTCTAATTCTGGTAGACTGTCT
GGACCAGCAGAACTCAGAAGTTTTAATATGCCTTCTTTGGATAAAATGGATGGGTCAATGCCTTCAGAAATGGAACCCAG
TAGAAATGATAGCAAAGATGATCTTGGTAATTTAAATGTGCCTGATTCATCTCTCCCTGCTGAAAATGAAGCCACTGGCC
CTGGCTTTGTTCCTCCACCTCTTGCTCCAATCAGAGGTCCATTGTTTCCAGTGGATACAAGAGGCCCATTCTTGAGAAGA
GGACCTCCTTTCCCCCCACCTCCTCCAGGAGCCATGTTTGGAGCTTCTCGAGATTATTTTCCACCAAGGGATTTCCCAGG
TCCACCACATGCTCCATTTGCAATGAGAAATGTCTATCCACCAAGGGGTTTTCCTCCTTACCTTCCCCCAAGACCTGGAT
TTTTCCCCCCACCCCCACATTCTGAAGGTAGGAGTGAGTTCCCTTCAGGTTTGATTCCACCTTCAAATGAGCCTGCTACT
GAACATCCAGAACGACAGCAAGAAACCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016105 | ortholog_one2many | 4 retrogenes | |
| Cavia porcellus | ENSCPOG00000026514 | possible_ortholog | 2 retrogenes | |
| Homo sapiens | ENSG00000150527 | possible_ortholog | 3 retrogenes | |
| Homo sapiens | ENSG00000258941 | ortholog_many2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000011990 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005768 | possible_ortholog | 9 retrogenes | |
| Pan troglodytes | ENSPTRG00000006297 | ortholog_many2many | 10 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000015890 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_nleu_688 | 84.87 | 66.50 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_nleu_1218 | 82.69 | 86.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_nleu_1690 | 82.60 | 67.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_nleu_2087 | 82.60 | 78.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_nleu_2103 | 84.36 | 86.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_nleu_2148 | 84.18 | 80.47 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_nleu_2600 | 85.51 | 85.91 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_nleu_2951 | 84.73 | 64.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_nleu_3017 | 85.32 | 83.56 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_nleu_3077 | 81.55 | 83.07 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSNLEG00000004121 retrocopies