Parental gene:

RP11-407N17.3, ENSG00000258941

Aliases:CTAGE5, MEA6, MGEA, MGEA11, MGEA6
Description:cTAGE family member 5 isoform 4 [Source:RefSeq peptide;Acc:NP_976231]
Organism:Human (Homo sapiens)
Coordinates:14:39703105..39820397(+)


>ENSG00000258941
ATGAGACCAGATTCTAATCTTTATGGTTTTCCATGGGAATTGGTGATATGTGCAGCTGTTGTTGGATTTTTTGCTGTTCT
CTTTTTTTTGTGGAGAAGTTTTAGATCGGTTAGGAGTCGGCTTTATGTGGGACGAGAGAAAAAGCTTGCTCTAATGCTTT
CTGGACTAATTGAAGAAAAAAGTAAACTACTTGAAAAATTTAGCCTTGTTCAAAAAGAGTATGAAGGCTATGAAGTAGAG
TCATCTTTAAAGGATGCCAGCTTTGAGAAGGAGGCAACAGAAGCACAAAGTTTGGAGGCAACCTGTGAAAAGCTGAACAG
GTCCAATTCTGAACTTGAGGATGAAATACTCTGTCTAGAAAAAGAGTTAAAAGAAGAGAAATCCAAACATTCTGAACAAG
ATGAATTGATGGCGGATATTTCAAAAAGGATACAGTCTCTAGAAGATGAGTCAAAATCCCTCAAATCACAAGTAGCTGAA
GCCAAAATGACCTTCAAGATATTTCAAATGAATGAAGAACGACTGAAGATAGCAATAAAAGATGCTTTGAATGAAAATTC
TCAACTTCAGGAAAGCCAGAAACAGCTTTTGCAAGAAGCTGAAGTATGGAAAGAACAAGTGAGTGAACTTAATAAACAGA
AAGTAACATTTGAAGACTCCAAAGTACATGCAGAACAAGTTCTAAATGATAAAGAAAGTCACATCAAGACTCTGACTGAA
CGCTTGTTAAAGATGAAAGATTGGGCTGCTATGCTTGGAGAAGACATAACGGATGATGATAACTTGGAATTAGAAATGAA
CAGTGAATCGGAAAATGGTGCTTACTTAGATAATCCTCCAAAAGGAGCTTTGAAGAAACTGATTCATGCTGCTAAGTTAA
ATGCTTCTTTAAAAACCTTAGAAGGAGAAAGAAACCAAATTTATATTCAGTTGTCTGAAGTTGATAAAACAAAGGAAGAG
CTTACAGAGCATATTAAAAATCTTCAGACTGAACAAGCATCTTTGCAGTCAGAAAACACACATTTTGAAAATGAGAATCA
GAAGCTTCAACAGAAACTTAAAGTAATGACTGAATTATATCAAGAAAATGAAATGAAACTCCACAGGAAATTAACAGTAG
AGGAAAATTATCGGTTAGAGAAAGAAGAGAAACTTTCTAAAGTAGATGAAAAGATCAGCCATGCCACTGAAGAGCTGGAG
ACCTATAGAAAGCGAGCCAAAGATCTTGAAGAAGAATTGGAGAGAACTATTCATTCTTATCAAGGGCAGATTATTTCCCA
TGAGAAAAAAGCACATGATAATTGGTTGGCAGCTCGGAATGCTGAAAGAAACCTCAATGATTTAAGGAAAGAAAATGCTC
ACAACAGACAAAAATTAACTGAAACAGAGCTTAAATTTGAACTTTTAGAAAAAGATCCTTATGCACTCGATGTTCCAAAT
ACAGCATTTGGCAGAGAGCATTCCCCATATGGTCCCTCACCATTGGGTTGGCCTTCATCTGAAACAAGAGCTTTTCTCTC
TCCTCCAACTTTGTTGGAGGGTCCACTCAGACTCTCACCTTTGCTTCCAGGGGGAGGAGGAAGAGGCTCACGAGGCCCAG
GGAATCCTCTGGACCATCAGATTACCAATGAAAGAGGAGAATCAAGCTGTGATAGGTTAACCGATCCTCATAGGGCTCCC
TCTGACACTGGGTCTCTGTCACCTCCATGGGACCAGGACCGTAGGATGATGTTTCCTCCGCCAGGACAATCATATCCTGA
TTCAGCCCTTCCTCCACAAAGGCAAGACAGATTTTGTTCTAATTCTGGTAGACTGTCTGGACCAGCAGAACTCAGAAGTT
TTAATATGCCTTCTTTGGATAAAATGGATGGGTCAATGCCTTCAGAAATGGAATCCAGTAGAAATGATACCAAAGATGAT
CTTGGTAATTTAAATGTGCCTGATTCATCTCTCCCTGCTGAAAATGAAGCCACTGGCCCTGGCTTTGTTCCTCCACCTCT
TGCTCCAATCAGAGGTCCATTGTTTCCAGTGGATGCAAGAGGCCCATTCTTGAGAAGAGGACCTCCTTTCCCCCCACCTC
CTCCAGGAGCCATGTTTGGAGCTTCTCGAGATTATTTTCCACCAGGGGATTTCCCAGGTCCACCACCTGCTCCATTTGCA
ATGAGAAATGTCTATCCACCGAGGGGTTTTCCTCCTTACCTTCCCCCAAGACCTGGATTTTTCCCCCCACCCCCACATTC
TGAAGGTAGAAGTGAGTTCCCCTCAGGTTTGATTCCACCTTCAAATGAGCCTGCTACTGAACATCCAGAACCACAGCAAG
AAACCTGA

Library Parental gene expression (RPM)
bodymap2_adipose 0 .00 RPM
bodymap2_adrenal 0 .00 RPM
bodymap2_brain 0 .00 RPM
bodymap2_breast 0 .00 RPM
bodymap2_colon 0 .00 RPM
bodymap2_heart 0 .00 RPM
bodymap2_kidney 0 .56 RPM
bodymap2_liver 0 .30 RPM
bodymap2_lung 0 .00 RPM
bodymap2_lymph_node 0 .00 RPM
bodymap2_ovary 0 .00 RPM
bodymap2_prostate 0 .00 RPM
bodymap2_skeletal_muscle 0 .00 RPM
bodymap2_testis 0 .00 RPM
bodymap2_thyroid 0 .00 RPM
bodymap2_white_blood_cells 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016105 ortholog_one2many 4 retrogenes
retro_cjac_1747, retro_cjac_2711, retro_cjac_3217, retro_cjac_921,
Cavia porcellus ENSCPOG00000026514 possible_ortholog 2 retrogenes
retro_cpor_189, retro_cpor_727,
Homo sapiens ENSG00000150527 within_species_paralog 3 retrogenes
retro_hsap_1201, retro_hsap_3691, retro_hsap_640,
Gorilla gorilla ENSGGOG00000011990 possible_ortholog 1 retrogene
retro_ggor_936,
Nomascus leucogenys ENSNLEG00000004121 ortholog_many2many 10 retrogenes
retro_nleu_1218, retro_nleu_1690, retro_nleu_2087, retro_nleu_2103, retro_nleu_2148, retro_nleu_2600, retro_nleu_2951, retro_nleu_3017, retro_nleu_3077, retro_nleu_688,
Pongo abelii ENSPPYG00000005768 possible_ortholog 9 retrogenes
retro_pabe_1001, retro_pabe_1002, retro_pabe_1007, retro_pabe_1055, retro_pabe_1060, retro_pabe_1588, retro_pabe_2119, retro_pabe_29, retro_pabe_3024,
Pan troglodytes ENSPTRG00000006297 ortholog_many2many 10 retrogenes
retro_ptro_1286, retro_ptro_1712, retro_ptro_2503, retro_ptro_2580, retro_ptro_2880, retro_ptro_466, retro_ptro_821, retro_ptro_826, retro_ptro_868, retro_ptro_876,
Ictidomys tridecemlineatus ENSSTOG00000015890 possible_ortholog 1 retrogene
retro_itri_95,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_78 88.59 55.64
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Download FASTA sequences of all ENSG00000258941 retrocopies