Parental gene: | ENSCJAG00000020103 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | X:40288038..40294019(-) |
>ENSCJAG00000020103
ATGAATCTGGAGAACATCATCCTCAGCAAACTGACACAAGAACAGAAAATGAAACACCGCATATTCTCACTCATAGCCAG
TCAGAGGTGGGATAGAGATGGGGTTTCACCATTTCGAGACCAGTCTGGCCAACATAGTGAAACTCCGCAGGCCAGCCAGG
CGTGGTGGCTCATGCCTGTAATCCCAGCGCTTTGGGAGGATGAGGCAGGTGGATCACCTGAGGTCAGGAGTTCAAGACCA
GCCTGGCCAACATGGCAAAACCCCATCTCTGTTAAAAATACA
ATGAATCTGGAGAACATCATCCTCAGCAAACTGACACAAGAACAGAAAATGAAACACCGCATATTCTCACTCATAGCCAG
TCAGAGGTGGGATAGAGATGGGGTTTCACCATTTCGAGACCAGTCTGGCCAACATAGTGAAACTCCGCAGGCCAGCCAGG
CGTGGTGGCTCATGCCTGTAATCCCAGCGCTTTGGGAGGATGAGGCAGGTGGATCACCTGAGGTCAGGAGTTCAAGACCA
GCCTGGCCAACATGGCAAAACCCCATCTCTGTTAAAAATACA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 0 .00 RPM |
| SRP051959_skeletal_muscle | 0 .00 RPM |
| SRP051959_lymph_node | 0 .00 RPM |
| SRP051959_lung | 0 .00 RPM |
| SRP051959_liver | 0 .02 RPM |
| SRP051959_kidney | 0 .00 RPM |
| SRP051959_heart | 0 .00 RPM |
| SRP051959_colon | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000034129 | within_species_paralog | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000027169 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000006176 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3387 | 55.93 | 62.77 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_3463 | 52.63 | 60.64 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_3466 | 52.63 | 60.64 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_3471 | 51.52 | 70.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cjac_3522 | 53.33 | 62.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_cjac_3527 | 56.45 | 64.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_cjac_3574 | 50.57 | 89.36 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_cjac_3575 | 55.17 | 60.64 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_cjac_3586 | 54.84 | 64.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_cjac_3699 | 55.74 | 63.83 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_cjac_3705 | 60.00 | 63.83 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_cjac_3737 | 55.93 | 62.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_cjac_3750 | 55.88 | 70.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_cjac_3753 | 56.45 | 64.89 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000020103 retrocopies