Parental gene: | ENSCJAG00000020635 |
| Aliases: | None |
| Description: | ATP synthase gamma chain [Source:UniProtKB/TrEMBL;Acc:F7I4L8] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 7:6210493..6228968(+) |
>ENSCJAG00000020635
ATGTTCTCTCGCGCGGGCGTCTCTGGGCTGTCGGCCTGGACCTTGCAGCCGCAATGGATTCAAGTTCGAAATATGGCAAC
TTTGAAAGATATTACCAGGCGACTAAAGTCCATCAAAAACATCCAGAAAATTACCAAGTCTATGAAAATGGTAGCAGCAG
CAAAATACGCCCGAGCTGAGAGAGAGCTGAAACCAGCTCGAATATATGGATTGGGATCTTTGGCTCTGTATGAGAAAGCT
GATATCAAGGGGCCTGAAGACAAGAAGAAACACCTCCTTATTGGTGTGTCCTCAGATCGAGGACTCTGTGGTGCTATTCA
CTCCTCCATTGCGAAACAGATGAAAAGCGAGGTTGCTACATTAACAGCAGCTGGGAAAGAAGTTATGCTTGTTGGAATTG
GTGACAAAATCAGAGGCATACTTTATAGGACTCATTCTGACCAGTTTCTAGCGGCATTCAAAGAAGTGGGAAGAAGGCCC
CCTACTTTTGGAGATGCGTCAGTCATTGCCCTTGAATTACTGAATTCTGGATATGAATTTGATGAAGGCTCTATCATCTT
TAATCGATTCAGCTCTAGGTCCGTTATCTCCTATAAGACAGAGGAAAAGCCCATCTTTTCCCTTAATACCATTGCAAGTG
CTGAGAGCATGAGTATCTACGATGACATTGATGCTGATGTGCTGCAAAATTACCAGGAATACAGTCTGGCCAACATCATC
TACTACTCTCTGAAGGAGTCCACCACTAGTGAGCAGAGTGCCAGGATGACAGCCATGGACAACGCCAGCAAGAATGCTTC
TGAGATGATTGACAAATTGACATTGACATTCAACCGGACCCGCCAAGCCGTCATCACAAAGGAGTTGATTGAAATCATCT
CTGGGGCTGCAGCTCTGGATTAA
ATGTTCTCTCGCGCGGGCGTCTCTGGGCTGTCGGCCTGGACCTTGCAGCCGCAATGGATTCAAGTTCGAAATATGGCAAC
TTTGAAAGATATTACCAGGCGACTAAAGTCCATCAAAAACATCCAGAAAATTACCAAGTCTATGAAAATGGTAGCAGCAG
CAAAATACGCCCGAGCTGAGAGAGAGCTGAAACCAGCTCGAATATATGGATTGGGATCTTTGGCTCTGTATGAGAAAGCT
GATATCAAGGGGCCTGAAGACAAGAAGAAACACCTCCTTATTGGTGTGTCCTCAGATCGAGGACTCTGTGGTGCTATTCA
CTCCTCCATTGCGAAACAGATGAAAAGCGAGGTTGCTACATTAACAGCAGCTGGGAAAGAAGTTATGCTTGTTGGAATTG
GTGACAAAATCAGAGGCATACTTTATAGGACTCATTCTGACCAGTTTCTAGCGGCATTCAAAGAAGTGGGAAGAAGGCCC
CCTACTTTTGGAGATGCGTCAGTCATTGCCCTTGAATTACTGAATTCTGGATATGAATTTGATGAAGGCTCTATCATCTT
TAATCGATTCAGCTCTAGGTCCGTTATCTCCTATAAGACAGAGGAAAAGCCCATCTTTTCCCTTAATACCATTGCAAGTG
CTGAGAGCATGAGTATCTACGATGACATTGATGCTGATGTGCTGCAAAATTACCAGGAATACAGTCTGGCCAACATCATC
TACTACTCTCTGAAGGAGTCCACCACTAGTGAGCAGAGTGCCAGGATGACAGCCATGGACAACGCCAGCAAGAATGCTTC
TGAGATGATTGACAAATTGACATTGACATTCAACCGGACCCGCCAAGCCGTCATCACAAAGGAGTTGATTGAAATCATCT
CTGGGGCTGCAGCTCTGGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 23 .97 RPM |
| SRP051959_skeletal_muscle | 95 .56 RPM |
| SRP051959_lymph_node | 26 .53 RPM |
| SRP051959_lung | 23 .64 RPM |
| SRP051959_liver | 49 .73 RPM |
| SRP051959_kidney | 59 .57 RPM |
| SRP051959_heart | 96 .77 RPM |
| SRP051959_colon | 39 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000005024 | ortholog_many2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000011229 | ortholog_one2many | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000010523 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000010549 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000000196 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000165629 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000009719 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000009207 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000016720 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000025781 | ortholog_one2many | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000011917 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000004642 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000015242 | ortholog_many2many | 2 retrogenes | |
| Procavia capensis | ENSPCAG00000004971 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002076 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000002277 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000006512 | ortholog_one2many | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000026133 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000011530 | ortholog_one2many | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000003035 | ortholog_one2many | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_526 | 94.28 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1079 | 85.41 | 93.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_1293 | 86.72 | 95.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_1381 | 94.30 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cjac_1636 | 81.95 | 68.69 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_cjac_2506 | 88.89 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_cjac_4190 | 84.85 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000020635 retrocopies