Parental gene:

LYPLA2, ENSCJAG00000020914

Aliases:None
Description:lysophospholipase II [Source:HGNC Symbol;Acc:6738]
Organism:Marmoset (Callithrix jacchus)
Coordinates:7:57819534..57824823(+)


>ENSCJAG00000020914
ATGTGTGGTAACACCATGTCTGTGCCCCTGCTCACCGATGCTGCCACCGTGTCTGGAGCTGAGCGGGAAACGGCCGCGGT
CATTTTTTTACATGGACTTGGAGACACAGGGCACAGCTGGGCTGACGCCCTCTCCACCATCCGGCTCCCTCATGTGAAGT
ACATCTGTCCCCATGCGCCTAGGATCCCTGTGACCCTCAACATGAAGATGGTGATGCCCTCCTGGTTTGACCTGATGGGG
CTGAGTCCAGATGCCCCAGAGGATGAGGCTGGCATCAAGAAGGCAGCAGAGAACATCAAGGCCTTGATTGAGCATGAAAT
GAAGAATGGGATCCCTGCCAATCGAATCGTCCCTGGGCGGCTTTTCGGCGGCTTTTCACAGGGTGGGGCCCTGTCCCTCT
ACACAGCCCTCACCTGCCCCCACCCTCTGGCTGGCATCGTGGCGTTGAGCTGCTGGCTGCCTTTACACCGGGCCTTCCCT
CAGGCAGCTAATGGCAGTGCCAAGGACCTGGCCATCCTCCAGTGCCATGGGGAGCTAGACCCCATGGTGCCTGTACGGTT
TGGGGCCCTGACGGCTGAGAAGCTCCGGTCTGTTGTCACACCTGCCAGGGTCCAGTTCAAGACATACCCAGGTGTCATGC
ACAGCTCCTGTCCTCAGGAGATGGCTGCTGTGAAGGAATTTCTTGAAAAGCTGCTGCCTCCTGTCTAA

Library Parental gene expression (RPM)
SRP051959_spleen 10 .63 RPM
SRP051959_skeletal_muscle 8 .63 RPM
SRP051959_lymph_node 12 .81 RPM
SRP051959_lung 11 .94 RPM
SRP051959_liver 10 .40 RPM
SRP051959_kidney 11 .78 RPM
SRP051959_heart 6 .40 RPM
SRP051959_colon 18 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000011625 ortholog_one2many 1 retrogene
retro_btau_1605,
Callithrix jacchus ENSCJAG00000011562 within_species_paralog 2 retrogenes
retro_cjac_1260, retro_cjac_3100,
Dasypus novemcinctus ENSDNOG00000011285 ortholog_one2one 2 retrogenes
retro_dnov_1186, retro_dnov_134,
Homo sapiens ENSG00000011009 ortholog_one2one 3 retrogenes
retro_hsap_2023, retro_hsap_3577, retro_hsap_4180,
Gorilla gorilla ENSGGOG00000004330 ortholog_one2one 3 retrogenes
retro_ggor_2114, retro_ggor_2413, retro_ggor_2626,
Macropus eugenii ENSMEUG00000004768 ortholog_one2one 2 retrogenes
retro_meug_1134, retro_meug_1526,
Microcebus murinus ENSMICG00000005841 ortholog_one2one 1 retrogene
retro_mmur_1166,
Nomascus leucogenys ENSNLEG00000008646 ortholog_one2one 1 retrogene
retro_nleu_2958,
Otolemur garnettii ENSOGAG00000032260 ortholog_one2one 1 retrogene
retro_ogar_2866,
Pongo abelii ENSPPYG00000001733 ortholog_one2one 1 retrogene
retro_pabe_142,
Tursiops truncatus ENSTTRG00000016127 ortholog_one2one 1 retrogene
retro_ttru_1522,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2585 58.23 99.57
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Download FASTA sequences of all ENSCJAG00000020914 retrocopies