Parental gene:

ENSCJAG00000035758

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:4:137602150..137607588(+)


>ENSCJAG00000035758
TTTTTTTTTTTTTTTTTGAGTTGGAGTTTTGCTCTTGTTGCTCTGGAGTGCAGTGGCCGGATCTCCACTCACCACAACCT
CCACCTCCTGGGTTCAAGAGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGTGCTACCACACCCAGC
TAATTTTAATGTATATTTTGTTAGAGACAGGGTTTCACCATGTTGGCCAGGTTGATCTCAAACTCCTGAGCTCGAGTGAT
CTGCCCACCTTGGCCTCCCAAAGTGCTGGGATCACAGGCATGAGCCACCATGCCCAGCCT

Library Parental gene expression (RPM)
SRP051959_colon 0 .00 RPM
SRP051959_heart 0 .05 RPM
SRP051959_kidney 0 .00 RPM
SRP051959_liver 0 .00 RPM
SRP051959_lung 0 .07 RPM
SRP051959_lymph_node 0 .00 RPM
SRP051959_skeletal_muscle 0 .00 RPM
SRP051959_spleen 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000008153 within_species_paralog 10 retrogenes
retro_cjac_3418, retro_cjac_3455, retro_cjac_3485, retro_cjac_3512, retro_cjac_3661, retro_cjac_3690, retro_cjac_3761, retro_cjac_3768, retro_cjac_3792, retro_cjac_3794,
Callithrix jacchus ENSCJAG00000018676 within_species_paralog 1 retrogene
retro_cjac_3468,
Callithrix jacchus ENSCJAG00000031577 within_species_paralog 1 retrogene
retro_cjac_3697,
Callithrix jacchus ENSCJAG00000031826 within_species_paralog 24 retrogenes
retro_cjac_3352, retro_cjac_3353, retro_cjac_3357, retro_cjac_3370, retro_cjac_3379, retro_cjac_3384, retro_cjac_3388, retro_cjac_3480, retro_cjac_3493, retro_cjac_3511, retro_cjac_3513, retro_cjac_3517, retro_cjac_3557, retro_cjac_3560, retro_cjac_3567, retro_cjac_3582, retro_cjac_3605, retro_cjac_3634, retro_cjac_3643, retro_cjac_3681, retro_cjac_3729, retro_cjac_3751, retro_cjac_3759, retro_cjac_3784,
Callithrix jacchus ENSCJAG00000032572 within_species_paralog 2 retrogenes
retro_cjac_3443, retro_cjac_3779,
Callithrix jacchus ENSCJAG00000033038 within_species_paralog 1 retrogene
retro_cjac_3439,
Callithrix jacchus ENSCJAG00000035420 within_species_paralog 16 retrogenes
retro_cjac_3386, retro_cjac_3407, retro_cjac_3449, retro_cjac_3457, retro_cjac_3509, retro_cjac_3531, retro_cjac_3580, retro_cjac_3594, retro_cjac_3635, retro_cjac_3645, retro_cjac_3652, retro_cjac_3657, retro_cjac_3685, retro_cjac_3755, retro_cjac_3760, retro_cjac_3804,
Callithrix jacchus ENSCJAG00000036542 within_species_paralog 13 retrogenes
retro_cjac_3360, retro_cjac_3431, retro_cjac_3440, retro_cjac_3459, retro_cjac_3538, retro_cjac_3558, retro_cjac_3576, retro_cjac_3615, retro_cjac_3636, retro_cjac_3665, retro_cjac_3691, retro_cjac_3721, retro_cjac_3803,
Callithrix jacchus ENSCJAG00000037288 within_species_paralog 16 retrogenes
retro_cjac_3393, retro_cjac_3447, retro_cjac_3475, retro_cjac_3499, retro_cjac_3518, retro_cjac_3519, retro_cjac_3535, retro_cjac_3561, retro_cjac_3603, retro_cjac_3662, retro_cjac_3667, retro_cjac_3703, retro_cjac_3710, retro_cjac_3715, retro_cjac_3727, retro_cjac_3793,
Callithrix jacchus ENSCJAG00000037961 within_species_paralog 5 retrogenes
retro_cjac_3573, retro_cjac_3711, retro_cjac_3723, retro_cjac_3766, retro_cjac_3778,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_286 67.68 98.00
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2. retro_cjac_3341 58.90 72.00
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3. retro_cjac_3380 64.36 99.00
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4. retro_cjac_3385 64.36 100.00
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5. retro_cjac_3409 62.50 86.00
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6. retro_cjac_3426 51.96 98.00
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7. retro_cjac_3427 54.46 97.00
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8. retro_cjac_3444 64.36 99.00
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9. retro_cjac_3448 56.31 98.00
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10. retro_cjac_3450 63.37 99.00
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11. retro_cjac_3494 52.75 91.00
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12. retro_cjac_3510 64.36 99.00
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13. retro_cjac_3533 67.01 95.00
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14. retro_cjac_3534 57.14 76.00
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15. retro_cjac_3552 60.49 80.00
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16. retro_cjac_3562 60.22 91.00
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17. retro_cjac_3579 53.54 97.00
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18. retro_cjac_3629 54.46 99.00
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19. retro_cjac_3632 54.02 85.00
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20. retro_cjac_3650 50.50 99.00
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21. retro_cjac_3673 54.90 100.00
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22. retro_cjac_3683 53.85 62.00
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23. retro_cjac_3695 62.14 100.00
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24. retro_cjac_3702 50.96 100.00
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25. retro_cjac_3716 68.63 100.00
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26. retro_cjac_3738 52.13 92.00
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27. retro_cjac_3748 53.62 67.00
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28. retro_cjac_3749 59.70 66.00
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29. retro_cjac_3752 66.00 99.00
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30. retro_cjac_3758 56.34 69.00
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31. retro_cjac_3769 52.00 98.00
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32. retro_cjac_3773 61.90 100.00
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33. retro_cjac_3785 62.00 96.00
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34. retro_cjac_3797 75.00 59.00
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Download FASTA sequences of all ENSCJAG00000035758 retrocopies