Parental gene:

ATP6V1G1, ENSCPOG00000000763

Aliases:None
Description:ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 [Source:HGNC Symbol;Acc:864]
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_2:77603700..77612186(-)


>ENSCPOG00000000763
NNNNNCCATTCCCAAGGAATCCAGCAGCTGCTGCAAGCCGAGAAGCGGGCCGCGGAGAAGGTGTCCGAGGCTCGCAAGCG
AAAGAACCGAAGACTGAAGCAGGCCAAAGAAGAAGCTCAGGCTGAGATTGAACAGTACCGCCTGCAGAGGGAGAAAGAGT
TCAAGGCTAAGGAAGCTGCGGCCTTAGGATCCCATGGCAGTTGCAGCAGTGAAGTGGAGAAGGAGACCCAGGAGAAGATG
GCTGTCCTGCAGCACTACTTCCAGCAGAACAGGGAGGAGGTCCTGGACAACCTCCTGGCCTTCGTCTGCGACATCCGGCC
AGAGATCCATGAAAACTACCGCATCAATGGA

Library Parental gene expression (RPM)
SRP017611_liver 21 .15 RPM
SRP017611_kidney 20 .41 RPM
SRP017611_brain 8 .11 RPM
SRP040447_lung 28 .85 RPM
SRP040447_skeletal_muscle 20 .58 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000020461 possible_ortholog 3 retrogenes
retro_cjac_1788, retro_cjac_2513, retro_cjac_76,
Dasypus novemcinctus ENSDNOG00000008083 ortholog_one2one 15 retrogenes
retro_dnov_1173, retro_dnov_1447, retro_dnov_1475, retro_dnov_1504, retro_dnov_1588, retro_dnov_1645, retro_dnov_193, retro_dnov_1998, retro_dnov_2179, retro_dnov_218, retro_dnov_2416, retro_dnov_245, retro_dnov_336, retro_dnov_479, retro_dnov_790,
Dipodomys ordii ENSDORG00000014850 ortholog_one2one 5 retrogenes
retro_dord_434, retro_dord_466, retro_dord_614, retro_dord_640, retro_dord_749,
Loxodonta africana ENSLAFG00000013437 possible_ortholog 2 retrogenes
retro_lafr_1002, retro_lafr_39,
Myotis lucifugus ENSMLUG00000008657 possible_ortholog 2 retrogenes
retro_mluc_373, retro_mluc_839,
Macaca mulatta ENSMMUG00000004899 possible_ortholog 4 retrogenes
retro_mmul_1783, retro_mmul_2018, retro_mmul_2046, retro_mmul_331,
Monodelphis domestica ENSMODG00000019574 ortholog_one2one 1 retrogene
retro_mdom_1675,
Mus musculus ENSMUSG00000039105 possible_ortholog 5 retrogenes
retro_mmus_2028, retro_mmus_2784, retro_mmus_2787, retro_mmus_3316, retro_mmus_819,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_204 80.34 97.44
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2. retro_cpor_688 62.16 94.02
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3. retro_cpor_742 74.56 96.58
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4. retro_cpor_852 53.85 96.58
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5. retro_cpor_1523 56.70 81.20
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Download FASTA sequences of all ENSCPOG00000000763 retrocopies