Parental gene: | ENSCPOG00000006442 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_4:12198412..12237388(+) |
>ENSCPOG00000006442
ATGGCCTTCACGTATTACAGTAGTCTGAATCGAGCTCAGCTAACTTTTGAATATCTGCACACAAATTCAACCACTCATGA
ATTTTTATTTGGAGCTCTTGCTGAACTGGTTGATAATGCAAGAGATGCTGATGCCACCAGAATAGACATTTATGCAGAAA
GGCGAGAGGATCTTCGAGGAGGATTTATGCTCTGCTTTTTGGATGATGGAGCAGGAATGGATCCCAGTGATGCTGCCAGT
GTGATCCAGTTTGGGAAGTCAGCCAAACGAACACCTGAATCCACCCAGATTGGGCAGTATGGGAATGGGTTAAAATCGGG
CTCAATGCGTATTGGGAAGGATTTTATTCTCTTCACTAAGAAGGAAGATACCATGACCTGCCTCTTCTTGTCTCGTACCT
TTCATGAGGAAGAAGGCATTGATGAAGTGATAGTCCCATTGCCCACCTGGAATGCCCAGACCCGGGAACCTGTTACAGAC
AATGTGGAGAAGTTTGCCATTGAAACAGAACTCATCTACAAGTATTCTCCCTTTCGCACTGAGGAGGAAGTGATGAACCA
GTTCATGAAGATTCCTGGGAACAGCGGAACATTGGTGATCATCTTTAATCTCAAGCTTATGGATAATGGAGAGCCTGAAC
TAGACATAATCTCAAATCCAAGAGATATCCAGATGGCAGAGACTTCCCCAGAGGGCACGAAGCCTGAACGGCGCTCTTTT
CGAGCCTATGCTGCGGTGCTTTACATTGATCCTCGAATGAGGATCTTTATCCATGGGCACAAGGTGCAGACCAAGAGGCT
TTCCTGCTGCTTGTATAAGCCCAGGATGTACAAGTACACGTCTAGCCGTTTCAAGACCCGTGCGGAGCAGGAAGTGAAGA
AAGCAGAACATGTGGCACGGATTGCTGAAGAGAAGGCCCGGGAGGCAGAGACCAAAGCTCGGACATTAGAAGTACGCTTA
GGTGGAGATCTCACGAGGGACTCCAGGGTGATGTTGAGACAGGTCCAGAATACTGCCATCACCCTGCGCAGAGAAGCTGA
TGTAAAGAAAAGGATCAAAGAGGCCAAGCAGCGTGCACTCAAAGAACCTAAGGAGCTGAATTTTGTTTTTGGGGTCAATA
TTGAACACCGGGACCTAGATGGGATGTTTATCTACAACTGTAGCCGCTTGATCAAGATGTATGAGAAAGTAGGCCCACAG
CTGGAAGGTGGCATGGCATGTGGTGGGGTCGTTGGGGTTGTTGATGTGCCTTACCTGGTCCTGGAGCCTACACACAACAA
GCAGGACTTTGCTGATGCCAAGGAGTACCGTCACCTACTGAGGGCGATGGGGGAGCACCTGGCACAGTACTGGAAGGACA
TTGCCATTGCCCAACGTGGAATCATCAAATTTTGGGATGAGTTTGGCTATCTCTCTGCCAACTGGAACCAGCCCCCATCC
AGTGAGCTGCGTTATAAACGCAGGAGAGCCATGGAAATCCCTACTACCATCCAGTGTGATTTGTGTCTGAAGTGGAGGAC
CCTTCCCTTCCAGTTGAATTCAGTGGAAAAAGATTACCCTGACACCTGGGTTTGTTCTATGAACCCTGATCCTGAGCAAG
ATCGATGTGAGGCTTCTGAACAAAAGCAGAAGGTTCCCCTGGGGACATTCAAAAAGGATCCAAAGACACAGGAAGAAAAG
CAGAAGCAGCTATCAGAGAAAATTCGCCAGCAGCAGGAAAAGCTGGAGGCCCTTCAGAAAACCACTCCCATTCGCTCCCA
AGCTGACCTGAAGAAACTGCCCTTAGAAGTGACAGCTAGACCTTCCAATGAGGAACCTGCTCGGAGACCTCAGCGTCCTC
GGTCACCACCCTTACCTGCTGTGATCAAGAATGCTCCAAGCAGACCACCTTCCCTGCAAGCTCCCAGACTAGTCAGCCAA
CCCCAAAAGGCTCCCATTATCAGCAATCCCCCAAAGCCTCCTGCTCTGGTAGCCCGGGTAGAGGCCAGTACCTCCAGGCT
GCTTCAGCCACCTGAGGCACCCCGAAAACCTGTGAACACTTCAATCAAGATTGTACCCAGGACCCCTTCTCTGGTGCAGC
CACTGTCATCATCTCTACTGCCAAACTCTAAGAGTTCTCGGGAGATCCCTGCACCCAAAGTTATCAAGACTCCAGTAGTC
AAGAAGCCAGAGCCACCTGTTAAACCCTCTCTGGCTACCACTGGTCGTAAGCGGAGTCTTGGGGTCTCTGATGAGGAAGA
AGCTGAAGAAGAGGCTGAAAGGAAGAAGGAGAAGTGTAAGCGGGGAAAATTTGCTGTGAAGGAGGAGAAGAAGGAATCCA
ATGAGCTCTCAGACAGTGCTGGGGAAGAAGACCCAGCTGACCTCAAAAAGGCTCAGAAAGATAAAGGGCTCCATGTGGAA
GTACGTGTGAACAGGGAGTGGTACACAGGCCGTGTCACAGCTGTAGAGGTGGGCAAGAATGTGGTGCGGTGGAAGGTGAA
GTTTGATTATGTGCCTACAGATACAACTCCAAGAGACCGCTGGGTGGAGAAAGGCAGTGAAGACGTGCGGCTGATGAAAC
CACCTTCTCCAGAGTATCAAACCCCTGACACACAACAAGAGGAGGAGGAAGAAGAGGCTGTAGTGGCTCAGCAGGCTGTA
GCCATGGCAGAGCCCTCTACCTCTGACTGTATCCGCATTGAGCCTGACACTACTGCTCCAAGTACCAACCATGAAACCAT
TGATCTCCTGGTCCAGATTCTCCGGAATTGCTTACGGTATTTCCTGCCTCCTAGTTTTCCCATCTCCAAGAAGGAGCTGA
GTGTTATGAATTCAGATGAGCTGATATCTTTTCCTCTGAAAGAATACTTCAAGCAATATGAAGTAGGGCTCCAGAATCTG
TGCCATTCCTACCAGAGCCGTGCTGACTCACGGGCCAAGGCATCTGAGGAAAGTCTGCGCACCTCTGAGCGGAAGCTCCG
TGAGACAGAGGAGAAGCTGCAGAAGCTGAGGACCAATATTGTAGCACTCCTGCAAAAGGTGCAGGAGGACATAGACATCA
ACACAGACGATGAGCTGGATGCCTACATCGAGGACCTCATCACCAAGGGGGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 35 .49 RPM |
| SRP017611_kidney | 54 .33 RPM |
| SRP017611_liver | 33 .30 RPM |
| SRP040447_lung | 45 .62 RPM |
| SRP040447_skeletal_muscle | 19 .25 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000009557 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000034543 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000009971 | ortholog_one2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000019624 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_17 | 76.07 | 100.00 | Please wait, loading  |
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Download FASTA sequences of all ENSCPOG00000006442 retrocopies