Parental gene: | PPIE, ENSCPOG00000007365 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_143:1718401..1731494(+) |
>ENSCPOG00000007365
ATGGCCACTACGAAGCGCGTGCTGTACGTGGGAGGGCTGGCAGAAGAGGTGGATGACAAAGTTCTACATGCTGCTTTTAT
TCCTTTTGGAGACATCACAGATATTCAGATTCCTCTGGATTATGAAACAGCAGAAAAGCACCGAGGATTTGCTTTTGTTG
AATTTGAGTTGGCAGAGGATGCAGCAGCAGCTATTGACAACATGAATGAATCTGAGCTCTTTGGACGGACAATTCGTGTC
AATTTGGCTAAACCAATGAGAATTAAAGAGGGCTCTTCTAGACCAGTTTGGTCAGACGATGACTGGCTAAAGAAGTTTTC
TGGGAAGACTCTTGAAGAGAATAAAGAGGAAGAAGGGACAGAAACTCCCAAAGCAGAAACCCAGGAGGGAGAGCCCCCTG
CAAAAAAGGCCCGGTCAAATCCTCAGGTGTACATGGACATCAAGATTGGGAACAAGCCAGCCGGCCGCATCCAGATGCTC
CTGCGTTCTGATGTTGTGCCCATGACAGCGGAGAATTTCCGCTGCCTGTGTACCCACGAAAAGGGCTATGGCTTCAAGGG
AAGCAGCTTCCACCGCATCATCCCCCAGTTCATGTGCCAGGGTGGGGATTTCACAAACCACAATGGCACCGGGGGCAAGT
CCATCTACGGGAAGAAGTTTGATGATGAAAATTTTATCCTCAAACACACAGGACCAGGCCTCCTCTCCATGGCCAACTCT
GGCCCAAATACCAACGGCTCCCAGTTCTTCCTGACCTGTGACAAGACGGACTGGCTGGATGGCAAGCACGTGGTGTTTGG
AGAGGTCACCGAAGGTCTGGATGTCTTGCGGCAGATTGAAGCCCAGGGCAGCAAGGACGGGAAACCAAAGCAGAAGGTGA
TCATCGCCGACTGTGGGGAGTACATGTGA
ATGGCCACTACGAAGCGCGTGCTGTACGTGGGAGGGCTGGCAGAAGAGGTGGATGACAAAGTTCTACATGCTGCTTTTAT
TCCTTTTGGAGACATCACAGATATTCAGATTCCTCTGGATTATGAAACAGCAGAAAAGCACCGAGGATTTGCTTTTGTTG
AATTTGAGTTGGCAGAGGATGCAGCAGCAGCTATTGACAACATGAATGAATCTGAGCTCTTTGGACGGACAATTCGTGTC
AATTTGGCTAAACCAATGAGAATTAAAGAGGGCTCTTCTAGACCAGTTTGGTCAGACGATGACTGGCTAAAGAAGTTTTC
TGGGAAGACTCTTGAAGAGAATAAAGAGGAAGAAGGGACAGAAACTCCCAAAGCAGAAACCCAGGAGGGAGAGCCCCCTG
CAAAAAAGGCCCGGTCAAATCCTCAGGTGTACATGGACATCAAGATTGGGAACAAGCCAGCCGGCCGCATCCAGATGCTC
CTGCGTTCTGATGTTGTGCCCATGACAGCGGAGAATTTCCGCTGCCTGTGTACCCACGAAAAGGGCTATGGCTTCAAGGG
AAGCAGCTTCCACCGCATCATCCCCCAGTTCATGTGCCAGGGTGGGGATTTCACAAACCACAATGGCACCGGGGGCAAGT
CCATCTACGGGAAGAAGTTTGATGATGAAAATTTTATCCTCAAACACACAGGACCAGGCCTCCTCTCCATGGCCAACTCT
GGCCCAAATACCAACGGCTCCCAGTTCTTCCTGACCTGTGACAAGACGGACTGGCTGGATGGCAAGCACGTGGTGTTTGG
AGAGGTCACCGAAGGTCTGGATGTCTTGCGGCAGATTGAAGCCCAGGGCAGCAAGGACGGGAAACCAAAGCAGAAGGTGA
TCATCGCCGACTGTGGGGAGTACATGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 13 .41 RPM |
| SRP017611_kidney | 16 .96 RPM |
| SRP017611_brain | 10 .81 RPM |
| SRP040447_lung | 20 .45 RPM |
| SRP040447_skeletal_muscle | 13 .36 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000002632 | other_paralog | 11 retrogenes | |
| Myotis lucifugus | ENSMLUG00000016233 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000014385 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000010049 | ortholog_one2one | 2 retrogenes | |
| Xenopus tropicalis | ENSXETG00000018981 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_560 | 70.64 | 70.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000007365 retrocopies