Parental gene:

CASP3, ENSCPOG00000012511

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_36:9602588..9609476(+)


>ENSCPOG00000012511
ATGGAGAACACTGAAAACTCAGTGGATGCAAAATCCATTAAAAATTTAGAAACAAAGGTCATACATGGAAGCAAATCAAT
GGACTCTGGAATATTCTTGGACAATAGATACAAAATGGATTATCCTGAAATGGGTTTATGTATAGTCATTAATAATAAGA
ACTTCCATAAAAGCACTGGAATGGCACCTCGACTTGGTACAGATGTAGATGCAGCAAGTATCAGAGAAACATTTATGAAC
TTGAAATACGAAGTGAGGAATAAAAATGATCTTTCATGTGAAGAAATAATGAACTTGATGTACAGTGTTTCCAAAGAAGA
TCATAGCAAAAGGAGCAGCTTTGTTTGTGTAATTCTAAGCCATGGTGAAGAAGGAAAAATTTTTGGAACAAATGGACCTG
TTGACTTGAAAAGATTAACAAAGTTCTTCAGAGGGGATCTTTGTAGAAGTTTAACTGGAAAACCCAAACTTTTCATTATT
CAGGCTTGCCGGGGCACAGAACTGGACTGTGGCATTGAGACGGACAGTGGTGTTGATGATGACATGACATGCCAGAAAAT
ACCAGTAGAGGCCGACTTTTTGTATGCATATTCCACAGCACCAGGT

Library Parental gene expression (RPM)
SRP017611_brain 2 .65 RPM
SRP017611_kidney 2 .62 RPM
SRP017611_liver 6 .49 RPM
SRP040447_lung 4 .11 RPM
SRP040447_skeletal_muscle 1 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000013931 ortholog_one2many 1 retrogene
retro_dnov_1013,
Microcebus murinus ENSMICG00000004809 ortholog_one2one 2 retrogenes
retro_mmur_1389, retro_mmur_691,
Macaca mulatta ENSMMUG00000012053 possible_ortholog 1 retrogene
retro_mmul_114,
Otolemur garnettii ENSOGAG00000005985 ortholog_one2one 2 retrogenes
retro_ogar_1756, retro_ogar_3263,
Rattus norvegicus ENSRNOG00000010475 ortholog_one2many 1 retrogene
retro_rnor_2747,
Sarcophilus harrisii ENSSHAG00000009178 ortholog_one2many 1 retrogene
retro_shar_404,
Ictidomys tridecemlineatus ENSSTOG00000003865 ortholog_one2many 2 retrogenes
retro_itri_172, retro_itri_586,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1203 64.42 51.49
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2. retro_cpor_1450 75.00 81.68
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Download FASTA sequences of all ENSCPOG00000012511 retrocopies