Parental gene:

ENSDNOG00000013931

Aliases:None
Description:None
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_5101:45833..53384(-)


>ENSDNOG00000013931
ATGGAGAACATTGAAAACTCAGTGGATTCGAAATCCATTAAAAATTCAGAAACAAAAATCTCACTTGGAAGCAAATCAGT
GGACTCTGGAATATCCTTGGATAGTAGTTACAAAATGGATTACCCTGAAATGGGTTTGTGTATAATAATTAATAACAAAA
ACTTTCACAAAAGCACTGGAATGGCATCTCGGTCTGGTACAGATGTAGATGCAGCAAACCTCAGGCAAACGTTCGGTAAC
TTGAATTATCAAGTCAGGAATAAAAATGATCTTACACGTGAAGAAATTATGGAATTGTTACGCAATGTTTCTAAAGAAGA
TCATAGCAAAAGGAGCAGTTTTATTTGTGTGATTCTAAGCCATGGTGAGGAAGGAATAATTTTTGGAACAGATGGACCTA
TTGACCTGAAAAAATTAACAAGTTTCTTCAGAGGGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTACTATTCCTGGCGAAATTCAAAGGATGGATCCT
GGTTTATCCAGTCACTTTGTGCTATGCTGAAACTCTACGCTCACAAGCTTGAACTTATGCACATCCTTACCCGGGTTAAT
CGAAAGGTAGCAATAGAATTTGAGTCCTATTGCCTTGACTCTTCTTTTCATGCAAAGAAGCAGATTCCATGTATTGTGTC
CATGCTCACAAAGGAACTGTATTTTTATCACTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 14 .20 RPM
SRP012922_cerebellum 6 .60 RPM
SRP012922_heart 1 .86 RPM
SRP012922_kidney 5 .20 RPM
SRP012922_liver 4 .80 RPM
SRP012922_lung 7 .18 RPM
SRP012922_quadricep_muscle 4 .15 RPM
SRP012922_spleen 11 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000005740 ortholog_one2many 2 retrogenes
retro_cjac_2678, retro_cjac_3011,
Cavia porcellus ENSCPOG00000012511 ortholog_one2many 2 retrogenes
retro_cpor_1203, retro_cpor_1450,
Dasypus novemcinctus ENSDNOG00000001797 other_paralog 1 retrogene
retro_dnov_1507,
Dipodomys ordii ENSDORG00000002554 ortholog_one2many 2 retrogenes
retro_dord_178, retro_dord_620,
Homo sapiens ENSG00000164305 ortholog_one2many 1 retrogene
retro_hsap_406,
Gorilla gorilla ENSGGOG00000025155 ortholog_one2many 1 retrogene
retro_ggor_402,
Microcebus murinus ENSMICG00000004809 ortholog_one2many 2 retrogenes
retro_mmur_1389, retro_mmur_691,
Macaca mulatta ENSMMUG00000012053 ortholog_many2many 1 retrogene
retro_mmul_114,
Nomascus leucogenys ENSNLEG00000010895 ortholog_one2many 1 retrogene
retro_nleu_1005,
Otolemur garnettii ENSOGAG00000005985 ortholog_one2many 2 retrogenes
retro_ogar_1756, retro_ogar_3263,
Pongo abelii ENSPPYG00000015236 ortholog_one2many 1 retrogene
retro_pabe_312,
Pan troglodytes ENSPTRG00000016640 ortholog_one2many 1 retrogene
retro_ptro_310,
Rattus norvegicus ENSRNOG00000010475 ortholog_many2many 1 retrogene
retro_rnor_2747,
Sarcophilus harrisii ENSSHAG00000009178 ortholog_many2many 1 retrogene
retro_shar_404,
Ictidomys tridecemlineatus ENSSTOG00000003865 ortholog_many2many 2 retrogenes
retro_itri_172, retro_itri_586,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1013 80.27 52.71
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Download FASTA sequences of all ENSDNOG00000013931 retrocopies