Parental gene:

AKIRIN2, ENSDNOG00000000549

Aliases:None
Description:akirin 2 [Source:HGNC Symbol;Acc:21407]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_6759:618331..639254(-)


>ENSDNOG00000000549
ATGGCGTGCGGAGCTACCCTGAAAAGGACTCTGGATTTCGACCCGCTGCTGAGCCCGGCGTCCCCGAAGCGGAGGCGATG
TGCGCCATTGTCGGCGCCCACCTCGGCCGCCGCCTCTCCCTCGGCCGCGGCCGCGGCCACCGCCGCCTCCTTCTCGGCCG
CCGCTGCTTCACCGCAGAAGTATCTTCGAATGGAGCCTTCCCCCTTCGGCGACGTCTCCTCCCGCCTCACCACAGAACAA
ATTCTGTATAACATAAAACAAGAGTATAAACGCATGCAGAAGAGAAGACATTTAGAAACTAGTTTCCAACAGACAGATCC
GTGTTGTGCCTCTGATGCACAACCACATGCATTTCTCCTCAGTGGACCAGCTTCACCAGGGACTTCATCTGCAACATCCT
CCCCATTAAAAAAAGAACAGCCCTTATTCACTCTCCGGCAAGTTGGGATGATCTGTGAACGTCTGTTGAAAGAACGTGAA
GAGAAAGTTCGAGAAGAGTATGAAGAAATATTGAATACAAAACTTGCAGAACAATATGATGCATTTGTGAAGTTTACGCA
TGATCAAATAATGCGACGATACGGAGAACAGCCTGCTAGTTATGTTTCATGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 18 .86 RPM
SRP012922_cerebellum 32 .03 RPM
SRP012922_heart 11 .60 RPM
SRP012922_kidney 26 .56 RPM
SRP012922_liver 19 .66 RPM
SRP012922_lung 22 .15 RPM
SRP012922_quadricep_muscle 10 .21 RPM
SRP012922_spleen 29 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003082 ortholog_one2one 1 retrogene
retro_cfam_1014,
Choloepus hoffmanni ENSCHOG00000012160 ortholog_one2one 1 retrogene
retro_chof_413,
Callithrix jacchus ENSCJAG00000000769 ortholog_one2one 1 retrogene
retro_cjac_2231,
Dasypus novemcinctus ENSDNOG00000000332 within_species_paralog 3 retrogenes
retro_dnov_1265, retro_dnov_1828, retro_dnov_509,
Homo sapiens ENSG00000135334 ortholog_one2one 1 retrogene
retro_hsap_2991,
Gorilla gorilla ENSGGOG00000002448 ortholog_one2one 1 retrogene
retro_ggor_2071,
Macaca mulatta ENSMMUG00000002824 ortholog_one2one 1 retrogene
retro_mmul_1914,
Pongo abelii ENSPPYG00000016831 ortholog_one2one 1 retrogene
retro_pabe_2477,
Pan troglodytes ENSPTRG00000018409 ortholog_one2one 1 retrogene
retro_ptro_2023,
Rattus norvegicus ENSRNOG00000008288 ortholog_one2one 1 retrogene
retro_rnor_1499,
Sorex araneus ENSSARG00000006084 ortholog_one2one 1 retrogene
retro_sara_701,
Sarcophilus harrisii ENSSHAG00000011555 ortholog_one2one 2 retrogenes
retro_shar_363, retro_shar_579,
Sus scrofa ENSSSCG00000004307 ortholog_one2one 1 retrogene
retro_sscr_897,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1788 64.66 56.65
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Download FASTA sequences of all ENSDNOG00000000549 retrocopies