Parental gene:

AKIRIN2, ENSPTRG00000018409

Aliases:None
Description:Pan troglodytes akirin 2 (AKIRIN2), mRNA. [Source:RefSeq mRNA;Acc:NM_001251907]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:6:88282530..88312124(-)


>ENSPTRG00000018409
ATGGCGTGCGGAGCCACTCTGAAAAGGACTCTGGATTTCGACCCGCTGTTGAGCCCGGCGTCCCCGAAGCGGAGGCGATG
TGCGCCATTGTCGGCGCCCACCTCGGCCGCTGCCTCCCCGTTGTCGGCGGCCGCGGCCACCGCCGCCTCCTTCTCCGCTG
CGGCCGCCTCGCCGCAGAAGTATCTCCGAATGGAGCCATCCCCCTTCGGCGACGTCTCCTCCCGCCTCACCACAGAACAA
ATTCTGTACAACATAAAACAAGAGTATAAACGAATGCAGAAGAGAAGACATTTAGAAACGAGTTTCCAACAGACAGATCC
GTGTTGTACTTCTGATGCACAGCCACATGCATTTCTCCTCAGTGGACCAGCTTCACCAGGGACTTCATCTGCAGCATCCT
CACCATTAAAAAAAGAACAGCCCTTATTTACTCTACGGCAGGTTGGGATGATCTGTGAACGTTTGTTGAAAGAACGTGAA
GAGAAAGTTCGAGAAGAATATGAAGAAATATTGAACACAAAACTTGCAGAACAATATGATGCGTTTGTGAAGTTTACGCA
TGATCAAATAATGCGACGATATGGAGAACAGCCTGCTAGTTATGTTTCATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 30 .99 RPM
SRP007412_cerebellum 30 .44 RPM
SRP007412_heart 15 .74 RPM
SRP007412_kidney 21 .37 RPM
SRP007412_liver 21 .44 RPM
SRP007412_testis 38 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003082 ortholog_one2one 1 retrogene
retro_cfam_1014,
Choloepus hoffmanni ENSCHOG00000012160 ortholog_one2one 1 retrogene
retro_chof_413,
Callithrix jacchus ENSCJAG00000000769 ortholog_one2one 1 retrogene
retro_cjac_2231,
Dasypus novemcinctus ENSDNOG00000000549 ortholog_one2one 1 retrogene
retro_dnov_1788,
Homo sapiens ENSG00000135334 ortholog_one2one 1 retrogene
retro_hsap_2991,
Gorilla gorilla ENSGGOG00000002448 ortholog_one2one 1 retrogene
retro_ggor_2071,
Macaca mulatta ENSMMUG00000002824 ortholog_one2one 1 retrogene
retro_mmul_1914,
Pongo abelii ENSPPYG00000016831 ortholog_one2one 1 retrogene
retro_pabe_2477,
Rattus norvegicus ENSRNOG00000008288 ortholog_one2one 1 retrogene
retro_rnor_1499,
Sorex araneus ENSSARG00000006084 ortholog_one2one 1 retrogene
retro_sara_701,
Sarcophilus harrisii ENSSHAG00000011555 ortholog_one2one 2 retrogenes
retro_shar_363, retro_shar_579,
Sus scrofa ENSSSCG00000004307 ortholog_one2one 1 retrogene
retro_sscr_897,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2023 84.96 54.68
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Download FASTA sequences of all ENSPTRG00000018409 retrocopies