Parental gene:

AKIRIN2, ENSPPYG00000016831

Aliases:None
Description:akirin 2 [Source:HGNC Symbol;Acc:21407]
Organism:Orangutan (Pongo abelii)
Coordinates:6:88621442..88648943(-)


>ENSPPYG00000016831
ATGGCGTGCGGAGCCACTCTGAAAAGGACTCTGGATTTCGACCCGCTGTTGAGCCCGGCGTCCCCGAAGCGGAGGCGATG
TGCGCCATTGTCGGCGCCCACCTCGGCCGCTGCCTCCCCGTTGTCGGCGGCCGCGGCCACCGCCGCCTCCTTCTCCGCTG
CGGCCGCCTCGCCGCAGAAGTATCTCCGAATGGAACCATCCCCCTTCGGCGACGTCTCCTCCCGCCTCACCACAGAACAA
ATTCTGTACAACATAAAACAAGAGTATAAACGAATGCAGAAGAGAAGACATTTAGAAACGAGTTTCCAACAGACAGATCC
GTGTTGTACTTCTGATGCACAGCCACATGCATTTCTCCTCAGTGGACCAGCTTCACCAGGGACTTCATCTGCAGCATCCT
CACCATTAAAAAAAGAACAGCCTTTATTTACTCTACGGCAGGTTGGGATGATCTGTGAACGTTTATTGAAAGAACGTGAA
GAGAAAGTTCGAGAAGAATATGAAGAAATATTGAACACAAAACTTGCAGAACAATATGATGCGTTTGTGAAGTTTACGCA
TGATCAGATAATGCGACGATATGGAGAACAGCCTGCTAGTTATGTTTCATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 26 .71 RPM
SRP007412_cerebellum 22 .37 RPM
SRP007412_heart 9 .93 RPM
SRP007412_kidney 14 .35 RPM
SRP007412_liver 16 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003082 ortholog_one2one 1 retrogene
retro_cfam_1014,
Choloepus hoffmanni ENSCHOG00000012160 ortholog_one2one 1 retrogene
retro_chof_413,
Callithrix jacchus ENSCJAG00000000769 ortholog_one2one 1 retrogene
retro_cjac_2231,
Dasypus novemcinctus ENSDNOG00000000549 ortholog_one2one 1 retrogene
retro_dnov_1788,
Homo sapiens ENSG00000135334 ortholog_one2one 1 retrogene
retro_hsap_2991,
Gorilla gorilla ENSGGOG00000002448 ortholog_one2one 1 retrogene
retro_ggor_2071,
Macaca mulatta ENSMMUG00000002824 ortholog_one2one 1 retrogene
retro_mmul_1914,
Pongo abelii ENSPPYG00000001511 within_species_paralog 2 retrogenes
retro_pabe_3137, retro_pabe_3646,
Pan troglodytes ENSPTRG00000018409 ortholog_one2one 1 retrogene
retro_ptro_2023,
Rattus norvegicus ENSRNOG00000008288 ortholog_one2one 1 retrogene
retro_rnor_1499,
Sorex araneus ENSSARG00000006084 ortholog_one2one 1 retrogene
retro_sara_701,
Sarcophilus harrisii ENSSHAG00000011555 ortholog_one2one 2 retrogenes
retro_shar_363, retro_shar_579,
Sus scrofa ENSSSCG00000004307 ortholog_one2one 1 retrogene
retro_sscr_897,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2477 86.92 51.72
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Download FASTA sequences of all ENSPPYG00000016831 retrocopies