Parental gene:

C1QBP, ENSDNOG00000008887

Aliases:None
Description:complement component 1, q subcomponent binding protein [Source:HGNC Symbol;Acc:1243]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_1336:289195..335344(-)


>ENSDNOG00000008887
ATGCTACCTCTGCTGCGCAGCGTGCCCCGTGCCCTGAGCTCCGCCGTCGCCGGCCTCCGCGCCACCGCGCCCTTGCCGCC
GCTCCGGCAGCTGCTGCAGCCGGTGCCCCGGTCGTGCACCCGGCCCTTCGGGCTGCTCAGCGTCCGTGCCGGATCCGTTC
GGCGGCCCGGCCTCCTGCGGTCTCGCGAGCCCTGCTCTTGTGGTTGTGGCGCGCTGCACACTGAAGGGGACAAAGCTTTT
GCGGAATTCCTGAATGATGAGATTAAGGAGGAGAAGAAGATCCAGAAGCATAAATCCCTCCCCAAGATGTCTGGAGGTTG
GGAACTGGAAGTGAATGGGACTGAAGCTAAATTAGTACGGAAAGTTGGAGGGGAAAAGGTCACTGTCACTTTCAACATTA
ATAATAGCATCCCACCACCATTCGATGGTGAGGAGGAGCCCTCACAAGGGCAGAAGGCTGAAGAGCAGGAGGAATTGATG
TCGACTCCTAATTTTGTGGTTGAAGTTATAAAGAATGATGGCAAGAAAGCCCTTGTGCTGGACTGTCACTACCCAGAGGA
TGAGGTTGGAAAAGAAGATGAGGATGAGAGTGACATTTTCTCCATCAGGGAAGTGAGCTTTCAGTCCACTGGCGAGCCTG
ACTGGAAAGACACTAACTATACACTCAACACAGATTCTCTGGACTGGGCCTTGTATGACCACCTAATGGATTTCTTAGCA
GACCGAGGGGTGGACAACACTTTCGCAGATGAGCTGGTGGAGCTCAGCACAGCCCTGGAGCACCAGGAATACATTACCTT
TCTAGAAGACCTCAAAAGTTTTGTTAAGAGCCAGTAG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 78 .18 RPM
SRP012922_cerebellum 40 .97 RPM
SRP012922_heart 49 .42 RPM
SRP012922_kidney 59 .96 RPM
SRP012922_liver 30 .81 RPM
SRP012922_lung 36 .35 RPM
SRP012922_quadricep_muscle 61 .44 RPM
SRP012922_spleen 38 .23 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006043 possible_ortholog 2 retrogenes
retro_amel_1734, retro_amel_356,
Callithrix jacchus ENSCJAG00000011352 ortholog_one2one 6 retrogenes
retro_cjac_2041, retro_cjac_2408, retro_cjac_4033, retro_cjac_604, retro_cjac_680, retro_cjac_946,
Felis catus ENSFCAG00000026474 possible_ortholog 3 retrogenes
retro_fcat_1135, retro_fcat_1763, retro_fcat_892,
Homo sapiens ENSG00000108561 ortholog_one2one 2 retrogenes
retro_hsap_1475, retro_hsap_2516,
Gorilla gorilla ENSGGOG00000002745 ortholog_one2one 5 retrogenes
retro_ggor_1133, retro_ggor_1569, retro_ggor_3007, retro_ggor_3008, retro_ggor_717,
Macropus eugenii ENSMEUG00000014882 ortholog_one2one 13 retrogenes
retro_meug_1068, retro_meug_1347, retro_meug_1363, retro_meug_1446, retro_meug_1901, retro_meug_1940, retro_meug_1970, retro_meug_2069, retro_meug_2128, retro_meug_434, retro_meug_580, retro_meug_988, retro_meug_989,
Macaca mulatta ENSMMUG00000006592 ortholog_one2one 1 retrogene
retro_mmul_1554,
Nomascus leucogenys ENSNLEG00000009081 ortholog_one2one 2 retrogenes
retro_nleu_2379, retro_nleu_3038,
Otolemur garnettii ENSOGAG00000001610 ortholog_one2one 5 retrogenes
retro_ogar_1376, retro_ogar_2502, retro_ogar_2518, retro_ogar_2879, retro_ogar_768,
Ochotona princeps ENSOPRG00000013150 ortholog_one2one 1 retrogene
retro_opri_408,
Pongo abelii ENSPPYG00000007870 ortholog_one2one 6 retrogenes
retro_pabe_1222, retro_pabe_1385, retro_pabe_1413, retro_pabe_1866, retro_pabe_1868, retro_pabe_670,
Pan troglodytes ENSPTRG00000008631 ortholog_one2one 3 retrogenes
retro_ptro_1140, retro_ptro_1461, retro_ptro_998,
Pteropus vampyrus ENSPVAG00000002466 ortholog_one2one 1 retrogene
retro_pvam_384,
Sarcophilus harrisii ENSSHAG00000002441 ortholog_one2one 2 retrogenes
retro_shar_620, retro_shar_813,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_702 70.51 55.04
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_dnov_1151 71.49 88.13
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_dnov_1946 65.22 55.76
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSDNOG00000008887 retrocopies