Parental gene:

ZDHHC4, ENSDNOG00000009165

Aliases:None
Description:zinc finger, DHHC-type containing 4 [Source:HGNC Symbol;Acc:18471]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_3259:32092..52192(+)


>ENSDNOG00000009165
ATGGACTTTCTGGTTCTCTTCCTGTTCTACCTGGCTTTGGTGCTGATGGGCGTTGTTACGATCTGCATCTGCTCGAAAGC
ACGTTGCTCGAGAGGCCTGTTCTGGGGAGGAGCACAGATATTTTCCTGTATAATTCCAGAATGCCTTCAGAAAGCCATGC
AGAGATTGCTCCATTACTTCTTGCATACGCGAAACCACACCTTCGTTGTCCTGCACCTCAGCCTGCAAGGAATGGTTTAT
ACCGAATACACTTGGGAAATACTTGGTTACTGTCAAGAGCTGGAGTTCTCCTTGTATTACCTTCTTCTGCCCTATCTGCT
GCTGTTTGTAAACCTGTGTTTTTTTGCCCTAAGTTGTGTGAGCAACCCTGGTACCGTAACAAAAGCAAATGAATTACTGC
TTCTTCAAGTATATGGATTCGATGAAGTGATGTTTCTGAAGAACACGAGGTGCCCTACTTGTGACTTAAAGAAGCCAGCT
CGATCCAAGCACTGCAGTGTGTGTAACCGGTGTGTGCACCGTTTTGACCATCACTGCGTTTGGGTGAACAACTGCATTGG
GGCCTGGAACGCCAGGTACTTCCTCATCTACCTCTTGACGTTGACGGCTTCGGCTGCCAGCCTGGCAAGTGTGAGCACCG
CGTTTCTGGTCCAGTTGGTGTTCTTGTCAGATCTGTACCAGGAGACTTATATTGATGACCTTGGGCACTCCCAGGTGGTT
GGCATCCTCTTTCTTAGTCAGTACCTGTTCCTGACCTTCCCAAGGATTGTCTTCATGCTGGGGTTTGTCGTGATCCTGAG
CTTCCTCCTGGGGGGCTACCTGTGTTTTGCTCTGTACTTGGCCATCACCAACCAGACCACTAACGAGTGGTACAGGGGGG
GCTGGGCTCGGTGCCAGCAGTGCCTCCACTCATCAAGACCCCCGTCAGCAGAGCCCCGAGTCTACCAGAACATTTACTCC
CATGGGGTTTGGAGCAACCTGAGCGAGATCTTCCTACCTGCTGCACATTATGAGAAAAAGAAGAACGCGTGG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 35 .78 RPM
SRP012922_cerebellum 23 .37 RPM
SRP012922_heart 20 .88 RPM
SRP012922_kidney 26 .56 RPM
SRP012922_liver 13 .31 RPM
SRP012922_lung 22 .60 RPM
SRP012922_quadricep_muscle 38 .42 RPM
SRP012922_spleen 21 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009547 ortholog_one2one 1 retrogene
retro_btau_643,
Homo sapiens ENSG00000136247 ortholog_one2one 1 retrogene
retro_hsap_1193,
Macaca mulatta ENSMMUG00000015545 ortholog_one2one 1 retrogene
retro_mmul_1283,
Nomascus leucogenys ENSNLEG00000015607 ortholog_one2one 1 retrogene
retro_nleu_2081,
Pongo abelii ENSPPYG00000017352 ortholog_one2one 1 retrogene
retro_pabe_993,
Pan troglodytes ENSPTRG00000018915 ortholog_one2one 1 retrogene
retro_ptro_3038,
Pteropus vampyrus ENSPVAG00000016104 ortholog_one2one 2 retrogenes
retro_pvam_1175, retro_pvam_758,
Ictidomys tridecemlineatus ENSSTOG00000011605 ortholog_one2one 1 retrogene
retro_itri_1054,
Tursiops truncatus ENSTTRG00000005001 ortholog_one2one 1 retrogene
retro_ttru_179,
Vicugna pacos ENSVPAG00000011480 ortholog_one2one 1 retrogene
retro_vpac_177,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_2610 62.71 50.29
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Download FASTA sequences of all ENSDNOG00000009165 retrocopies