Parental gene: | ZDHHC4, ENSMMUG00000015545 |
| Aliases: | None |
| Description: | probable palmitoyltransferase ZDHHC4 [Source:RefSeq peptide;Acc:NP_001248568] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 3:44811436..44827149(+) |
>ENSMMUG00000015545
ATGGACTTCCTGATCCTCTTCTTGTTCTACCTGGCTTTGGTGGTGATGGGTCTTGTTCTTATCTGCGTCTGCTCGAAAAC
CCATAGCTTGAAAGGCCTGGCCAGGGGAGGAGCACAGATATTTTCCTGTGTAATTCCAGAATGTCTTCAGAGAGCCATGC
ACAGATCGCTTCACTACCTTTTCCATACGAGAAACCACACCTTCATTGTCCTGCACCTGGTCTTGCAAGCGATGGTTTAT
ACTGAGTACACCTGGGAAGTATTTGGCTACTGTCAGGAGCTGGAGTTCTCCTTGTATTACCTTCTTCTGCCCTATCTGCT
GCTAGTTGTAAACCTGTTTTCTTTCACCCTGACTTGTGTAACCAATCCTGGCATTATAACAAAAGCAAATGAATTATTAT
TTCTTCATGTTTATGAATTTGATGAAGTGATGTTTCCAAAGAACGTGAGGTGCTCTACTTGTGCTTTAAGGAAACCAGCT
CGATCCAAGCACTGCAGTGTGTGTAACTGGTGTGTGCACCGTTTCGACCATCACTGTGTTTGGGTGAACAACTGCATCGG
GGCCTGGAACATCAGGTACTTCCTCATCTACCTCTTGACCTTGACGGCCTCGGCTGCCACCGTCGCCATTGTGAGCACCA
CTTTTCTGATCCACTTGGTGGTGATGTCGGATCTATACCAGGAGACTTATGTCGATGACCTTGGACACCTCCATGTTATG
GACACGGTCTTCCTTATTCAGTACCTCTTCCTGACTTTTCCACGGATTGTCTTCATGCTGGGCTTTGTCGTGGTCCTGAG
CTTCCTCCTGGGTGGCTACCTGTGCTTTGCCCTGTACCTGGCGGCCACCAATCAGACTACTAATGAGTGGTACAGAGGTG
ACTGGGCCTGGTGCCAGCGTTGTCCCCTTGTGGCCTGGCCTCCATCAGCAGAGCCCCAAGTCCACCGGAACATTCACTCC
CACGGGCTTCGGAGCAACCTTCAAGAGATCTTTCTACCTGCCTTTCCATGTCATGGGAGGAAGAAACAAGAATGA
ATGGACTTCCTGATCCTCTTCTTGTTCTACCTGGCTTTGGTGGTGATGGGTCTTGTTCTTATCTGCGTCTGCTCGAAAAC
CCATAGCTTGAAAGGCCTGGCCAGGGGAGGAGCACAGATATTTTCCTGTGTAATTCCAGAATGTCTTCAGAGAGCCATGC
ACAGATCGCTTCACTACCTTTTCCATACGAGAAACCACACCTTCATTGTCCTGCACCTGGTCTTGCAAGCGATGGTTTAT
ACTGAGTACACCTGGGAAGTATTTGGCTACTGTCAGGAGCTGGAGTTCTCCTTGTATTACCTTCTTCTGCCCTATCTGCT
GCTAGTTGTAAACCTGTTTTCTTTCACCCTGACTTGTGTAACCAATCCTGGCATTATAACAAAAGCAAATGAATTATTAT
TTCTTCATGTTTATGAATTTGATGAAGTGATGTTTCCAAAGAACGTGAGGTGCTCTACTTGTGCTTTAAGGAAACCAGCT
CGATCCAAGCACTGCAGTGTGTGTAACTGGTGTGTGCACCGTTTCGACCATCACTGTGTTTGGGTGAACAACTGCATCGG
GGCCTGGAACATCAGGTACTTCCTCATCTACCTCTTGACCTTGACGGCCTCGGCTGCCACCGTCGCCATTGTGAGCACCA
CTTTTCTGATCCACTTGGTGGTGATGTCGGATCTATACCAGGAGACTTATGTCGATGACCTTGGACACCTCCATGTTATG
GACACGGTCTTCCTTATTCAGTACCTCTTCCTGACTTTTCCACGGATTGTCTTCATGCTGGGCTTTGTCGTGGTCCTGAG
CTTCCTCCTGGGTGGCTACCTGTGCTTTGCCCTGTACCTGGCGGCCACCAATCAGACTACTAATGAGTGGTACAGAGGTG
ACTGGGCCTGGTGCCAGCGTTGTCCCCTTGTGGCCTGGCCTCCATCAGCAGAGCCCCAAGTCCACCGGAACATTCACTCC
CACGGGCTTCGGAGCAACCTTCAAGAGATCTTTCTACCTGCCTTTCCATGTCATGGGAGGAAGAAACAAGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 6 .11 RPM |
| SRP007412_brain | 6 .16 RPM |
| SRP007412_cerebellum | 4 .58 RPM |
| SRP007412_heart | 8 .60 RPM |
| SRP007412_kidney | 20 .89 RPM |
| SRP007412_liver | 36 .14 RPM |
| SRP007412_testis | 72 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009547 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000009165 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000136247 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015607 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000017352 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000018915 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000016104 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000011605 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000005001 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000011480 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_1283 | 66.54 | 75.87 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000015545 retrocopies