Parental gene:

CRIPT, ENSECAG00000012342

Aliases:None
Description:cysteine-rich PDZ-binding protein [Source:HGNC Symbol;Acc:14312]
Organism:Horse (Equus caballus)
Coordinates:15:52336218..52344010(-)


>ENSECAG00000012342
ATGGTGTGCGAAAAATGTGAAAAGAAACTTGGTACTGTTATCACTCCAGATACCTGGAAAGATGGTGCAAGGAATACCAC
AGAAAGTGGTGGAAGAAAGCTGAACGAAAATAAAGCTTTGACCTCAAAAAAAGCAAGATTTGATCCATATGGAAAGAATA
AGTTCTCCACTTGCAGAATTTGTAAAAGTTCTGTGCACCAACCGGGTTCTCATTACTGCCAGGGCTGTGCCTACAAAAAG
GGTATCTGTGCGATGTGTGGAAAAAAAGTTTTGGATACCAAAAACTATAAGCAAACATCTGTCTAG

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 2 .24 RPM
SRP021940_cerebellum 3 .53 RPM
SRP021940_embryo 2 .28 RPM
SRP021940_placental_villous 5 .53 RPM
SRP021940_synovial_membrane 2 .31 RPM
SRP021940_testis 2 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000015723 ortholog_one2one 2 retrogenes
retro_btau_315, retro_btau_523,
Canis familiaris ENSCAFG00000002633 ortholog_one2one 1 retrogene
retro_cfam_1105,
Choloepus hoffmanni ENSCHOG00000000556 ortholog_one2one 7 retrogenes
retro_chof_1031, retro_chof_1059, retro_chof_1241, retro_chof_2093, retro_chof_235, retro_chof_634, retro_chof_956,
Cavia porcellus ENSCPOG00000008081 ortholog_one2one 1 retrogene
retro_cpor_1128,
Dipodomys ordii ENSDORG00000006085 ortholog_one2one 1 retrogene
retro_dord_788,
Felis catus ENSFCAG00000015610 ortholog_one2one 1 retrogene
retro_fcat_1369,
Microcebus murinus ENSMICG00000009133 ortholog_one2one 1 retrogene
retro_mmur_30,
Myotis lucifugus ENSMLUG00000004193 ortholog_one2one 2 retrogenes
retro_mluc_1480, retro_mluc_2080,
Macaca mulatta ENSMMUG00000005388 ortholog_one2one 1 retrogene
retro_mmul_1191,
Monodelphis domestica ENSMODG00000000973 ortholog_one2one 1 retrogene
retro_mdom_532,
Otolemur garnettii ENSOGAG00000008089 ortholog_one2one 6 retrogenes
retro_ogar_1206, retro_ogar_1967, retro_ogar_2609, retro_ogar_2734, retro_ogar_3132, retro_ogar_984,
Rattus norvegicus ENSRNOG00000015215 ortholog_one2one 1 retrogene
retro_rnor_2485,
Tarsius syrichta ENSTSYG00000002853 ortholog_one2one 2 retrogenes
retro_tsyr_1596, retro_tsyr_85,
Vicugna pacos ENSVPAG00000000315 ortholog_one2one 1 retrogene
retro_vpac_417,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_310 79.61 100.00
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2. retro_ecab_366 71.25 79.21
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Download FASTA sequences of all ENSECAG00000012342 retrocopies