Parental gene:

STMN1, ENSECAG00000021662

Aliases:None
Description:stathmin 1 [Source:HGNC Symbol;Acc:6510]
Organism:Horse (Equus caballus)
Coordinates:2:29515144..29518750(+)


>ENSECAG00000021662
ATGGCTTCTTCTGATATCCAGGTGAAAGAACTGGAGAAGCGGGCCTCAGGCCAGGCTTTTGAGCTGATTCTCAGCCCTCG
ATCAAAAGAATCTGTCCCAGAATTCCCCCTTTCTCCTCCAAAGAAGAAGGATCTTTCCCTGGAGGAAATTCAGAAGAAAT
TAGAAGCTGCAGAAGAAAGACGCAAGTCCCATGAAGCTGAGGTCTTGAAGCAGCTTGCTGAGAAACGAGAGCACGAGAAA
GAAGTGCTTCAGAAAGCAATAGAAGAGAACAACAACTTCAGTAAAATGGCGGAAGAGAAACTGACCCACAAAATGGAAGC
CAACAAAGAGAACCGAGAGGCACAAATGGCTGCCAAACTGGAGCGTTTGCGGGAGAAGGACAAGCACATTGAAGAAGTGC
GGAAGAACAAAGAATCCAAAGATCCTGCTGATGAGACTGAAGCTGACTAA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 22 .48 RPM
SRP021940_embryo 377 .73 RPM
SRP021940_cerebellum 64 .60 RPM
SRP021940_testis 294 .59 RPM
SRP021940_placental_villous 36 .23 RPM
SRP021940_articular_cartilage 2 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013761 ortholog_one2one 1 retrogene
retro_btau_247,
Callithrix jacchus ENSCJAG00000009462 possible_ortholog 2 retrogenes
retro_cjac_3206, retro_cjac_474,
Loxodonta africana ENSLAFG00000006089 possible_ortholog 1 retrogene
retro_lafr_84,
Mustela putorius furo ENSMPUG00000015774 ortholog_one2one 1 retrogene
retro_mputfur_1191,
Oryctolagus cuniculus ENSOCUG00000006493 possible_ortholog 1 retrogene
retro_ocun_56,
Rattus norvegicus ENSRNOG00000016810 ortholog_one2one 4 retrogenes
retro_rnor_1604, retro_rnor_1855, retro_rnor_2048, retro_rnor_765,
Sorex araneus ENSSARG00000011057 ortholog_one2one 2 retrogenes
retro_sara_271, retro_sara_764,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_490 69.13 98.66
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Download FASTA sequences of all ENSECAG00000021662 retrocopies