Parental gene:

STMN1, ENSBTAG00000013761

Aliases:None
Description:Stathmin [Source:UniProtKB/Swiss-Prot;Acc:Q3T0C7]
Organism:Cow (Bos taurus)
Coordinates:2:127773926..127779431(+)


>ENSBTAG00000013761
ATGGCTTCTTCTGATATCCAGGTGAAGGAACTGGAGAAGCGTGCCTCAGGCCAGGCTTTTGAGCTGATTCTCAGCCCTCG
ATCAAAAGAATCTGTCCCAGAATTTCCCCTTTCCCCTCCTAAGAAGAAGGATCTTTCCCTGGAGGAAATTCAGAAGAAAT
TAGAAGCTGCAGAGGAAAGACGCAAGTCCCATGAAGCTGAGGTCTTGAAGCAGCTTGCTGAGAAACGGGAGCACGAGAAA
GAAGTGCTTCAGAAGGCGATAGAGGAGAACAACAACTTCAGTAAGATGGCGGAAGAGAAGCTGACCCACAAGATGGAGGC
CAACAAAGAGAACCGAGAGGCGCAGATGGCCGCCAAGCTGGAGCGCTTGCGGGAGAAGGACAAGCACATTGAAGAAGTGC
GGAAGAACAAAGAATCCAAAGACCCTGCTGATGAGACTGAAGCCGACTAA

Library Parental gene expression (RPM)
ERP005899_liver 6 .13 RPM
ERP005899_muscle 73 .43 RPM
SRP017611_brain 225 .84 RPM
SRP017611_kidney 14 .17 RPM
SRP017611_liver 0 .83 RPM
SRP030211_testis 223 .52 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000009462 possible_ortholog 2 retrogenes
retro_cjac_3206, retro_cjac_474,
Cavia porcellus ENSCPOG00000011075 possible_ortholog 1 retrogene
retro_cpor_1505,
Equus caballus ENSECAG00000021662 ortholog_one2one 1 retrogene
retro_ecab_490,
Loxodonta africana ENSLAFG00000006089 possible_ortholog 1 retrogene
retro_lafr_84,
Mustela putorius furo ENSMPUG00000015774 ortholog_one2one 1 retrogene
retro_mputfur_1191,
Mus musculus ENSMUSG00000028832 possible_ortholog 3 retrogenes
retro_mmus_1660, retro_mmus_2470, retro_mmus_3383,
Oryctolagus cuniculus ENSOCUG00000006493 possible_ortholog 1 retrogene
retro_ocun_56,
Pteropus vampyrus ENSPVAG00000006344 possible_ortholog 1 retrogene
retro_pvam_53,
Rattus norvegicus ENSRNOG00000016810 ortholog_one2many 4 retrogenes
retro_rnor_1604, retro_rnor_1855, retro_rnor_2048, retro_rnor_765,
Sorex araneus ENSSARG00000011057 ortholog_one2one 2 retrogenes
retro_sara_271, retro_sara_764,
Sarcophilus harrisii ENSSHAG00000006382 possible_ortholog 1 retrogene
retro_shar_391,
Ictidomys tridecemlineatus ENSSTOG00000021708 possible_ortholog 5 retrogenes
retro_itri_1806, retro_itri_1833, retro_itri_554, retro_itri_819, retro_itri_826,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_247 76.51 100.00
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Download FASTA sequences of all ENSBTAG00000013761 retrocopies