Parental gene:

ENSEEUG00000004422

Aliases:None
Description:None
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_8458:5247..34977(+)


>ENSEEUG00000004422
ATGGCCACCTCTGTGGAGCTCAGCACCAAAGCAAGAATTTCCTTAACTGGCTTGGGCACCAAGTCCTCCCCAGGCAAAGT
CAAAGAGGCCGTGAAGGTGGCCATTGATACAGGATATCGTCACATTGACTGTGCCTATTTTTATCAGAATGAGAATGAGG
TGGGGGAAGCCATCCAAGAGAAGATTCAAGAGAAGGTTGTGAAGAGGGAGGACCTCTTCATTGTCAGCAAGTTATGGCTC
ACCTTCTTTGAGAAAGCCCGTGTGAAGAAAGCTTGTCAGAAGACCCTCAGTGACCTGAAACTAGACTACCTGGACATCTA
TCTTATTCACTTTCCACAGGGATTACAAGGTGAAAAGGACATGTTCCCCAAAGATGCTAACGGCAAAGTCCTTGGTGGTA
ATACAACATTTTTGGAAGCTTGGGAGGGCATGGAAGAGCTGGTGGATGAGGGGCTTGTCAAGGGCATTGGAATTTCTAAC
TTCAACCACTTACAAATTGAAAGGCTCTTGAACAAACCTGGACTGAAACATAAACCACTAACTAACCAGGTTGAGTCTCA
TCCATACCTCACACAGGATAAATTGATCCACTACTGCCGCTCCAATGGCATCGTTATCACAGCTTACAGCCCTCTGGGAT
CTCCAGATAGACCTTGGGCAAAACTAGATGACCCTTCTCTGATGGAAGATACCAAGATTAAGGCAATTGCTACAAAGCAT
AAAAAATCCACAGCCCAGATTCTGCTCCGATTCCAAATCCAGAGGAATGTGGCTGTGATCCCCAAGTCGGTGACACCAGC
ACGGATCATTGAGAACTTTAATGTATTTGAATTTAAATTGAATGATGAGTATATGGACACCACTTTCGACTTCAATAGAA
ACAGGGTCTGCAGTGTACAGCAGTTTTCTCATTTGAGGGATTATCCCTTCCATGAAGAAATCTGA

Library Parental gene expression (RPM)
SRP017611_brain 0 .00 RPM
SRP017611_kidney 0 .00 RPM
SRP017611_liver 62 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000166 ortholog_one2many 1 retrogene
retro_chof_400,
Callithrix jacchus ENSCJAG00000012250 ortholog_one2many 1 retrogene
retro_cjac_3038,
Echinops telfairi ENSETEG00000006005 ortholog_one2many 3 retrogenes
retro_etel_1055, retro_etel_1643, retro_etel_748,
Homo sapiens ENSG00000198074 ortholog_many2many 1 retrogene
retro_hsap_581,
Macaca mulatta ENSMMUG00000013098 ortholog_many2many 2 retrogenes
retro_mmul_1357, retro_mmul_2455,
Mus musculus ENSMUSG00000029762 ortholog_many2many 1 retrogene
retro_mmus_627,
Mus musculus ENSMUSG00000052131 ortholog_many2many 1 retrogene
retro_mmus_2860,
Mus musculus ENSMUSG00000061758 ortholog_many2many 1 retrogene
retro_mmus_1490,
Nomascus leucogenys ENSNLEG00000013088 ortholog_one2many 1 retrogene
retro_nleu_801,
Pongo abelii ENSPPYG00000018018 ortholog_one2many 1 retrogene
retro_pabe_606,
Pan troglodytes ENSPTRG00000019718 ortholog_many2many 1 retrogene
retro_ptro_428,
Rattus norvegicus ENSRNOG00000009734 ortholog_many2many 3 retrogenes
retro_rnor_2380, retro_rnor_2588, retro_rnor_657,
Sorex araneus ENSSARG00000001396 ortholog_one2many 1 retrogene
retro_sara_608,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_681 64.59 65.29
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Download FASTA sequences of all ENSEEUG00000004422 retrocopies