Parental gene: | ENSETEG00000006005 |
| Aliases: | None |
| Description: | None |
| Organism: | Lesser hedgehog tenrec (Echinops telfairi) |
| Coordinates: | GeneScaffold_8390:18588..30029(-) |
>ENSETEG00000006005
ATGGCCACCTTCGTGGAGCTCCTCACCAAAGCCAAGATGCCCATCGTGGGCCTGGGCACCTGGAAGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGAGAAGCTCAAGGAGAAGGTGGTGAAGCGCGAGGACCTGTTCATCGTCAGCAAGCTGTGG
TCCACCTTCTTCGAGAGGCCCCTGGTGAAGGAAGCCTGCCGGAAGACCCTTAATGATCTGAAACTGGACTACCTGGACAT
CTACCTAATACACTGGCCTCAGGGCCTGAAGCCTGGGAAGGAGATCCTCCCTAAAGACGAAGCAGGCAACCTGCTCTGTT
GCAAGGCAACGTTCGTGGACGCCTGGGAGGCCATGGAGAAGCTGGTGGAGAGGCTGGTGAAAGCCTTTGGCGTCTCCATT
TTCAACCACTCCCAGATTGAGAGGCTCTGGAACAAGCCCGGACTGAAACACAAGCCAGTGATGAACCAGGTGGAGTGTCA
CCCATACCTCACGCAGGAGAAGCTGATCCAGTACTGCCATTCCAAGGGCATCGCAGTCACTGCCTACAGCCCCCTGGGCT
CTCCAGACAGACCTTGGGTCCAACCAGAGGACCCTTCACTGCTGGAACACCCCAAGATTAAGGAGATTGCCGCAAAGCAT
AACAAGACCCCTGCCCAGGTTCTGATCCGCTTCCATATCCAGAGGAATGTGGTTGTGATCCCCAAGTCTGTAACCCCCAA
ACGCATTGTTGAGAACTTCCAG
ATGGCCACCTTCGTGGAGCTCCTCACCAAAGCCAAGATGCCCATCGTGGGCCTGGGCACCTGGAAGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGAGAAGCTCAAGGAGAAGGTGGTGAAGCGCGAGGACCTGTTCATCGTCAGCAAGCTGTGG
TCCACCTTCTTCGAGAGGCCCCTGGTGAAGGAAGCCTGCCGGAAGACCCTTAATGATCTGAAACTGGACTACCTGGACAT
CTACCTAATACACTGGCCTCAGGGCCTGAAGCCTGGGAAGGAGATCCTCCCTAAAGACGAAGCAGGCAACCTGCTCTGTT
GCAAGGCAACGTTCGTGGACGCCTGGGAGGCCATGGAGAAGCTGGTGGAGAGGCTGGTGAAAGCCTTTGGCGTCTCCATT
TTCAACCACTCCCAGATTGAGAGGCTCTGGAACAAGCCCGGACTGAAACACAAGCCAGTGATGAACCAGGTGGAGTGTCA
CCCATACCTCACGCAGGAGAAGCTGATCCAGTACTGCCATTCCAAGGGCATCGCAGTCACTGCCTACAGCCCCCTGGGCT
CTCCAGACAGACCTTGGGTCCAACCAGAGGACCCTTCACTGCTGGAACACCCCAAGATTAAGGAGATTGCCGCAAAGCAT
AACAAGACCCCTGCCCAGGTTCTGATCCGCTTCCATATCCAGAGGAATGTGGTTGTGATCCCCAAGTCTGTAACCCCCAA
ACGCATTGTTGAGAACTTCCAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000166 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000012250 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000004422 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000006450 | within_species_paralog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000009155 | other_paralog | 1 retrogene | |
| Homo sapiens | ENSG00000198074 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000013098 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000029762 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000052131 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000061758 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013088 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018018 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000019718 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000009734 | ortholog_one2many | 3 retrogenes | |
| Sorex araneus | ENSSARG00000001396 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_etel_748 | 81.48 | 78.10 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_etel_1055 | 90.74 | 78.10 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_etel_1643 | 85.12 | 78.10 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSETEG00000006005 retrocopies