Parental gene:

AKR1B10, ENSPPYG00000018018

Aliases:None
Description:aldo-keto reductase family 1, member B10 (aldose reductase) [Source:HGNC Symbol;Acc:382]
Organism:Orangutan (Pongo abelii)
Coordinates:7:131633224..131647055(+)


>ENSPPYG00000018018
ATGGCCACCTTTGTGGAGCTCAGTACCAAAGCCAAGATGCCCATTGTGGGCCTGGGCACTTGGAAGTCTCCTCTCGGCAA
AGTGAAAGAAGCAGTGACGGTGGCCATTGATGCAGGATATCGCCACATTGACTGTGCCTATGTCTATCAGAATGAACATG
AGGTGGGGGAAGCCATCCAAGAGAAGATCCAAGAGAAGGCTGTGAAGCGGGAGGACCTGTTCATTGTCAGCAAGGTGTGG
CCTACTTTCTTTGAGAGACCCCTTGTGAGGAAAGCCTTTGAGAAGACCCTCAAGGACCTGAAGCTGAGCTATCTGGACGT
CTATCTTATTCACTGGCCACAGGGATTCAAGTCTGGGGATGACCTTTTCCCCAAAGATGATAAAGGTAATGCCATCGGTG
GAAAAGCAACATTCTTGGATGCCTGGGAGGCCATGGAGGAGCTGGTGGACGAGGGGCTGGTGAAAGCCCTTGGGGTCTCC
AATTTCAGCCACTTCCAGATCGAGAAGCTCTTGAACAAACCTGGACTGAAATATAAACCAGTGACTAACCAGGTTGAGTG
TCACCCATACCTCACACAGGAGAAACTGATCCAGTACTGCCACTCCAAGGGCATCACCGTTACGGCCTACAGCCCCCTGG
GCTCTCCGGATAGACCTTGGGCCAAGCCAGAGGACCCTTCCCTGCTGGAGGATCCCAAGATTAAGGAGATTGCGGCAAAG
CACAAAAAAACCGCAGCCCAGGTTCTGATCCGTTTCCATATCCAGAGGAATGTGATTGTGATCCCCAAGTCTGTGACACC
AGCACGCATTGTTGAGAACATTCAGGTCTTTGACTTCAAATTGAGTGACGAGGAGATGGCAACCATACTCAGCTTCAACA
GAAACTGGAGGGCCTGTAACGTGTTGCAATCCTCTCATTTGGAAGACTATCCCTTTGATGCAGAATATTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .15 RPM
SRP007412_kidney 0 .89 RPM
SRP007412_liver 8 .26 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000166 ortholog_one2one 1 retrogene
retro_chof_400,
Callithrix jacchus ENSCJAG00000012250 ortholog_one2one 1 retrogene
retro_cjac_3038,
Erinaceus europaeus ENSEEUG00000004422 ortholog_one2many 1 retrogene
retro_eeur_681,
Echinops telfairi ENSETEG00000006005 ortholog_one2one 3 retrogenes
retro_etel_1055, retro_etel_1643, retro_etel_748,
Homo sapiens ENSG00000198074 ortholog_one2one 1 retrogene
retro_hsap_581,
Macaca mulatta ENSMMUG00000013098 ortholog_one2many 2 retrogenes
retro_mmul_1357, retro_mmul_2455,
Mus musculus ENSMUSG00000029762 ortholog_one2many 1 retrogene
retro_mmus_627,
Mus musculus ENSMUSG00000052131 ortholog_one2many 1 retrogene
retro_mmus_2860,
Mus musculus ENSMUSG00000061758 ortholog_one2many 1 retrogene
retro_mmus_1490,
Nomascus leucogenys ENSNLEG00000013088 ortholog_one2one 1 retrogene
retro_nleu_801,
Pongo abelii ENSPPYG00000018017 within_species_paralog 8 retrogenes
retro_pabe_1050, retro_pabe_1089, retro_pabe_1176, retro_pabe_1672, retro_pabe_2411, retro_pabe_3691, retro_pabe_370, retro_pabe_694,
Pongo abelii ENSPPYG00000018037 other_paralog 1 retrogene
retro_pabe_406,
Pan troglodytes ENSPTRG00000019718 ortholog_one2one 1 retrogene
retro_ptro_428,
Rattus norvegicus ENSRNOG00000009734 ortholog_one2many 3 retrogenes
retro_rnor_2380, retro_rnor_2588, retro_rnor_657,
Sorex araneus ENSSARG00000001396 ortholog_one2one 1 retrogene
retro_sara_608,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_606 89.31 100.00
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Download FASTA sequences of all ENSPPYG00000018018 retrocopies