Parental gene:

Akr1b8, ENSRNOG00000009734

Aliases:None
Description:aldose reductase-related protein 2 [Source:RefSeq peptide;Acc:NP_775159]
Organism:Rat (Rattus norvegicus)
Coordinates:4:61491247..61503814(+)


>ENSRNOG00000009734
ATGGCAACCTTCGTGGAGCTCAGTACCAAAGCCAAGATGCCCATTGTGGGTCTGGGCACCTGGAAGTCTACGCCAAACCA
AGTCAAGGAAGCTGTGAAGGCAGCCATTGATGCTGGGTATCGCCATATTGACTGTGCGTATGCATATTGCAACGAGAATG
AGGTGGGGGAAGCCATCCAAGAGAAGATCAAAGAGAAGGCTGTGAGGCGGGAGGACCTCTTCATTGTCAGCAAGTTGTGG
CCCACCTGCTTTGAGAAAAAACTGCTAAAGGAAGCCTTTCAGAAGACCCTCACGGATCTCAAGCTGGACTACTTGGACCT
CTATCTTATCCACTGGCCTCAGGGATTTCAGGCAGGGAAGGAGTTATTCCCCAAAGATGAACAAGGCAACGTCCTCCCCA
GTAAAACAACATTCCTGGAAGCCTGGGAGGGCATGGAGGAACTGGTGGACCAGGGGCTGGTGAAAGCTTTGGGCGTCTCC
AACTTCAACCACTTCCAGATCGAAAGGCTCCTGAACAAGCCTGGACTGAAACATAAGCCAGTGACCAACCAGGTCGAGTG
CCACCCTTACCTCACCCAGGAAAAACTGATCCAGTACTGTCACTCCAAGGGCATCGTGGTCACAGCCTACAGTCCCCTGG
GCTCCCCAGACAGGCCTAGGGCCAAGCCAGATGACCCTTCACTATTACAGGACCCCAAGATTAAAGAGATTGCCGCCAAG
CACAAGAAAACCACAGCCCAGGTTCTTATTCGGTTCCACATCCAGAGGAACGTGGTAGTGATCCCCAAGTCTGTGACGCC
AGCACGTATACAGGAGAACATTCAGGTCTTTGACTTCCAGTTGAGCGACCAGGAGATGGCCACTATCCTGAGCTTCAACA
GAAACTGGAGGGCCTGCCTGCTGCCTGAGACAGTCAACATGGAAGAGTTTCCCTATGACGCAGAGTACTGA

Library Parental gene expression (RPM)
SRP017611_brain 0 .29 RPM
SRP017611_kidney 10 .54 RPM
SRP017611_liver 3 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000166 ortholog_one2many 1 retrogene
retro_chof_400,
Callithrix jacchus ENSCJAG00000012250 ortholog_one2many 1 retrogene
retro_cjac_3038,
Erinaceus europaeus ENSEEUG00000004422 ortholog_many2many 1 retrogene
retro_eeur_681,
Echinops telfairi ENSETEG00000006005 ortholog_one2many 3 retrogenes
retro_etel_1055, retro_etel_1643, retro_etel_748,
Homo sapiens ENSG00000198074 ortholog_many2many 1 retrogene
retro_hsap_581,
Macaca mulatta ENSMMUG00000013098 ortholog_many2many 2 retrogenes
retro_mmul_1357, retro_mmul_2455,
Nomascus leucogenys ENSNLEG00000013088 ortholog_one2many 1 retrogene
retro_nleu_801,
Pongo abelii ENSPPYG00000018018 ortholog_one2many 1 retrogene
retro_pabe_606,
Pan troglodytes ENSPTRG00000019718 ortholog_many2many 1 retrogene
retro_ptro_428,
Rattus norvegicus ENSRNOG00000009513 within_species_paralog 1 retrogene
retro_rnor_1438,
Rattus norvegicus ENSRNOG00000013004 other_paralog 1 retrogene
retro_rnor_2559,
Rattus norvegicus ENSRNOG00000017165 within_species_paralog 1 retrogene
retro_rnor_1441,
Rattus norvegicus ENSRNOG00000038361 other_paralog 1 retrogene
retro_rnor_2046,
Sorex araneus ENSSARG00000001396 ortholog_one2many 1 retrogene
retro_sara_608,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_657 85.78 64.24
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2. retro_rnor_2380 86.49 58.54
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3. retro_rnor_2588 74.35 58.54
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Download FASTA sequences of all ENSRNOG00000009734 retrocopies