Parental gene:

UBE2W, ENSEEUG00000011886

Aliases:None
Description:ubiquitin-conjugating enzyme E2W (putative) [Source:HGNC Symbol;Acc:25616]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_1692:49375..118204(-)


>ENSEEUG00000011886
AAACGGTTGCAGAAAGAGCTGTTGGCTTTGCAAAATGACCCACCTCCTGGGATGACGTTAAATGAAAAGAGTGTTCAGAA
TTCAATTACACAGTGGATTGTAGACATGGAAGGTGCACCAGGTACCTTATATGAAGGGGAAAAGTTTCAACTTCTATTTA
AATTTAGTAGTAGATATCCTTTTGACTCTCCTCAGGTCATGTTTACTGGTGAAAATATTCCTGTTCATCCTCATGTGTAT
AGCAATGGGCATATCTGTTTATCCATTCTAACGGAAGACTGGTCTCCAGCGCTTTCAGTCCAGTCAGTGTGTCTTAGCAT
TATTAGCATGCTGTCCAGCTGCAAAGAAAAGAGACGACCACCAGATAATTCATTTTATGTTCGAACATGTAACAAGAACC
CAAAGAAAACAAAATGGTGGTATCATGATGATACTTGTTGA

Library Parental gene expression (RPM)
SRP017611_brain 25 .78 RPM
SRP017611_kidney 13 .13 RPM
SRP017611_liver 6 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005910 ortholog_one2one 4 retrogenes
retro_chof_1114, retro_chof_1974, retro_chof_889, retro_chof_957,
Dasypus novemcinctus ENSDNOG00000012909 ortholog_one2one 2 retrogenes
retro_dnov_1378, retro_dnov_962,
Erinaceus europaeus ENSEEUG00000010643 within_species_paralog 14 retrogenes
retro_eeur_113, retro_eeur_177, retro_eeur_249, retro_eeur_253, retro_eeur_266, retro_eeur_272, retro_eeur_294, retro_eeur_346, retro_eeur_375, retro_eeur_518, retro_eeur_592, retro_eeur_604, retro_eeur_641, retro_eeur_80,
Myotis lucifugus ENSMLUG00000027009 ortholog_one2one 3 retrogenes
retro_mluc_1510, retro_mluc_1900, retro_mluc_619,
Sorex araneus ENSSARG00000007886 ortholog_one2one 2 retrogenes
retro_sara_306, retro_sara_464,
Tupaia belangeri ENSTBEG00000011410 ortholog_one2one 3 retrogenes
retro_tbel_1929, retro_tbel_4440, retro_tbel_682,
Vicugna pacos ENSVPAG00000001527 ortholog_one2one 2 retrogenes
retro_vpac_115, retro_vpac_227,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_41 84.35 77.40
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Download FASTA sequences of all ENSEEUG00000011886 retrocopies